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hinfp histone H4 transcription factor [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108260423, updated on 14-Mar-2024

Summary

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Gene symbol
hinfp
Gene description
histone H4 transcription factor
See related
Ensembl:ENSIPUG00000008809
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 28
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 28 NC_030443.2 (10564254..10575451, complement)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 28 NC_030443.1 (9104823..9116918, complement)

Chromosome 28 - NC_030443.2Genomic Context describing neighboring genes Neighboring gene ATP-binding cassette, sub-family G (WHITE), member 4a Neighboring gene C4b-binding protein alpha chain Neighboring gene dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase) Neighboring gene c2cd2 like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome Display During Testicular Differentiation of Channel Catfish (Ictalurus punctatus) as Revealed by RNA-Seq Analysis. Zeng Q, et al. Biol Reprod, 2016 Jul. PMID 27307075, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone H4 transcription factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030443.2 Reference Coco_2.0 Primary Assembly

    Range
    10564254..10575451 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017460711.3 → XP_017316200.1  histone H4 transcription factor

    UniProtKB/TrEMBL
    A0A2D0QEP7
    Related
    ENSIPUP00000012924.1

  2. XM_017460712.3 → XP_017316201.1  histone H4 transcription factor

    UniProtKB/TrEMBL
    A0A2D0QEP7
Nucleotide Protein
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Gene LinkOut

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