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slc22a2 solute carrier family 22 member 2 [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108257975, updated on 14-Mar-2024

Summary

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Gene symbol
slc22a2
Gene description
solute carrier family 22 member 2
See related
Ensembl:ENSIPUG00000020774
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 25
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 25 NC_030440.2 (16116514..16127910)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 25 NC_030440.1 (3707111..3716262, complement)

Chromosome 25 - NC_030440.2Genomic Context describing neighboring genes Neighboring gene tudor domain containing 15 Neighboring gene transfer RNA leucine (anticodon CAG) Neighboring gene insulin-like growth factor 2 receptor Neighboring gene centromere protein J Neighboring gene plasminogen Neighboring gene G protein-coupled receptor 31

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome Display During Testicular Differentiation of Channel Catfish (Ictalurus punctatus) as Revealed by RNA-Seq Analysis. Zeng Q, et al. Biol Reprod, 2016 Jul. PMID 27307075, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables organic cation transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in organic cation transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 22 member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030440.2 Reference Coco_2.0 Primary Assembly

    Range
    16116514..16127910
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017456172.3 → XP_017311661.1  solute carrier family 22 member 2

    UniProtKB/TrEMBL
    A0A2D0Q1U8, W5UBH4
    Related
    ENSIPUP00000030783.1
Nucleotide Protein
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