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gpatch3 G patch domain containing 3 [ Kryptolebias marmoratus (mangrove rivulus) ]

Gene ID: 108249036, updated on 10-Apr-2024

Summary

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Gene symbol
gpatch3
Gene description
G patch domain containing 3
See related
EnsemblRapid:ENSKMAG00010005524
Gene type
protein coding
RefSeq status
MODEL
Organism
Kryptolebias marmoratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Kryptolebias
Orthologs
human zebrafish all
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Genomic context

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See gpatch3 in Genome Data Viewer
Location:
chromosome: LG16
Exon count:
7
Annotation release Status Assembly LG Location
102 current ASM164957v2 (GCF_001649575.2) LG16 NC_051445.1 (16345887..16349429, complement)
101 previous assembly ASM164957v1 (GCF_001649575.1) Unplaced Scaffold NW_016094642.1 (49868..53866, complement)

Linkage Group LG16 - NC_051445.1Genomic Context describing neighboring genes Neighboring gene AT-rich interaction domain 1Aa Neighboring gene GPN-loop GTPase 2 Neighboring gene nuclear receptor subfamily 0, group B, member 2a Neighboring gene keratinocyte differentiation factor 1a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of RIG-I signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of type I interferon production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
G patch domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Kryptolebias marmoratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM164957v2 Primary Assembly

Genomic

  1. NC_051445.1 Reference ASM164957v2 Primary Assembly

    Range
    16345887..16349429 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017438171.3 → XP_017293660.1  G patch domain-containing protein 3

    UniProtKB/TrEMBL
    A0A3Q3BD22
    Related
    ENSKMAP00010011301.1, ENSKMAT00010011875.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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