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pard3ba par-3 family cell polarity regulator beta a [ Kryptolebias marmoratus (mangrove rivulus) ]

Gene ID: 108246713, updated on 10-Apr-2024

Summary

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Gene symbol
pard3ba
Gene description
par-3 family cell polarity regulator beta a
See related
EnsemblRapid:ENSKMAG00010008793
Gene type
protein coding
RefSeq status
MODEL
Organism
Kryptolebias marmoratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Kryptolebias
Also known as
pard3b
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: LG23
Exon count:
25
Annotation release Status Assembly LG Location
102 current ASM164957v2 (GCF_001649575.2) LG23 NC_051452.1 (4071929..4221337, complement)
101 previous assembly ASM164957v1 (GCF_001649575.1) Unplaced Scaffold NW_016094470.1 (217900..369119, complement)

Linkage Group LG23 - NC_051452.1Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily B member 6 (LAN blood group) a Neighboring gene neuropilin 2a Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase family member 2-like Neighboring gene zona pellucida sperm-binding protein 3 Neighboring gene uncharacterized LOC119616723

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of cell polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of centrosome localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment or maintenance of epithelial cell apical/basal polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in apical junction complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell cortex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
par-3 family cell polarity regulator beta a
Names
partitioning defective 3 homolog B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Kryptolebias marmoratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM164957v2 Primary Assembly

Genomic

  1. NC_051452.1 Reference ASM164957v2 Primary Assembly

    Range
    4071929..4221337 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017434394.3 → XP_017289883.1  par-3 family cell polarity regulator beta a isoform X1

    UniProtKB/TrEMBL
    A0A3Q3BAE3, A0A3Q3BMJ5
    Related
    ENSKMAP00010019061.1, ENSKMAT00010019800.1

  2. XM_017434395.3 → XP_017289884.1  par-3 family cell polarity regulator beta a isoform X2

    UniProtKB/TrEMBL
    A0A3Q3BAE3
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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