U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

sptssb serine palmitoyltransferase, small subunit B [ Kryptolebias marmoratus (mangrove rivulus) ]

Gene ID: 108240843, updated on 13-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
sptssb
Gene description
serine palmitoyltransferase, small subunit B
Gene type
protein coding
RefSeq status
MODEL
Organism
Kryptolebias marmoratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Kryptolebias
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See sptssb in Genome Data Viewer
Location:
chromosome: LG2
Exon count:
2
Annotation release Status Assembly LG Location
102 current ASM164957v2 (GCF_001649575.2) LG2 NC_051431.1 (11122600..11127681)
101 previous assembly ASM164957v1 (GCF_001649575.1) Unplaced Scaffold NW_016094319.1 (1261365..1266403)

Linkage Group LG2 - NC_051431.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent, 1Lb Neighboring gene NMD3 ribosome export adaptor Neighboring gene otolin 1b Neighboring gene high affinity immunoglobulin gamma Fc receptor I

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine C-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of serine C-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of serine C-palmitoyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
serine palmitoyltransferase small subunit B

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Kryptolebias marmoratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM164957v2 Primary Assembly

Genomic

  1. NC_051431.1 Reference ASM164957v2 Primary Assembly

    Range
    11122600..11127681
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017424639.3 → XP_017280128.1  serine palmitoyltransferase small subunit B

    UniProtKB/TrEMBL
    A0A3Q3BC92
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.