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hamp hepcidin antimicrobial peptide [ Kryptolebias marmoratus (mangrove rivulus) ]

Gene ID: 108240334, updated on 10-Apr-2024

Summary

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Gene symbol
hamp
Gene description
hepcidin antimicrobial peptide
See related
EnsemblRapid:ENSKMAG00010016542
Gene type
protein coding
RefSeq status
MODEL
Organism
Kryptolebias marmoratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Kryptolebias
Orthologs
human zebrafish all
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Genomic context

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See hamp in Genome Data Viewer
Location:
chromosome: LG16
Exon count:
3
Annotation release Status Assembly LG Location
102 current ASM164957v2 (GCF_001649575.2) LG16 NC_051445.1 (5832796..5833824)
101 previous assembly ASM164957v1 (GCF_001649575.1) Unplaced Scaffold NW_016094313.1 (1800619..1801615, complement)

Linkage Group LG16 - NC_051445.1Genomic Context describing neighboring genes Neighboring gene upstream stimulatory factor 2 Neighboring gene electron transfer flavoprotein subunit beta Neighboring gene uncharacterized LOC112450758 Neighboring gene IgLON family member 5 Neighboring gene signal-regulatory protein beta-1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in defense response to bacterium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular iron ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hepcidin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Kryptolebias marmoratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM164957v2 Primary Assembly

Genomic

  1. NC_051445.1 Reference ASM164957v2 Primary Assembly

    Range
    5832796..5833824
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017423722.3 → XP_017279211.1  hepcidin-1

    UniProtKB/TrEMBL
    A0A3Q3BAM8
    Related
    ENSKMAP00010036369.1, ENSKMAT00010037983.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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