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prex1 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 [ Kryptolebias marmoratus (mangrove rivulus) ]

Gene ID: 108233131, updated on 10-Apr-2024

Summary

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Gene symbol
prex1
Gene description
phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1
See related
EnsemblRapid:ENSKMAG00010022944
Gene type
protein coding
RefSeq status
MODEL
Organism
Kryptolebias marmoratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Kryptolebias
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG8
Exon count:
40
Annotation release Status Assembly LG Location
102 current ASM164957v2 (GCF_001649575.2) LG8 NC_051437.1 (25082474..25163861)
101 previous assembly ASM164957v1 (GCF_001649575.1) Unplaced Scaffold NW_016094258.1 (2761623..2843002)

Linkage Group LG8 - NC_051437.1Genomic Context describing neighboring genes Neighboring gene Ral GTPase activating protein non-catalytic subunit beta Neighboring gene von Willebrand factor A domain containing 1 Neighboring gene potassium voltage-gated channel subfamily KQT member 2-like Neighboring gene cholinergic receptor, nicotinic, alpha 4b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Kryptolebias marmoratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM164957v2 Primary Assembly

Genomic

  1. NC_051437.1 Reference ASM164957v2 Primary Assembly

    Range
    25082474..25163861
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017411373.3 → XP_017266862.1  phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein isoform X1

    UniProtKB/TrEMBL
    A0A3Q2ZX52
    Related
    ENSKMAP00010049115.1, ENSKMAT00010052408.1

  2. XM_017411377.3 → XP_017266866.1  phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein isoform X2

    UniProtKB/TrEMBL
    A0A3Q2ZX18, A0A3Q2ZX52
    Related
    ENSKMAP00010049127.1, ENSKMAT00010052420.1
Nucleotide Protein
Heading Accession and Version

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