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ppp1r16b protein phosphatase 1, regulatory subunit 16B [ Kryptolebias marmoratus (mangrove rivulus) ]

Gene ID: 108231662, updated on 10-Apr-2024

Summary

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Gene symbol
ppp1r16b
Gene description
protein phosphatase 1, regulatory subunit 16B
See related
EnsemblRapid:ENSKMAG00010023674
Gene type
protein coding
RefSeq status
MODEL
Organism
Kryptolebias marmoratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Kryptolebias
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG4
Exon count:
12
Annotation release Status Assembly LG Location
102 current ASM164957v2 (GCF_001649575.2) LG4 NC_051433.1 (8582469..8667986)
101 previous assembly ASM164957v1 (GCF_001649575.1) Unplaced Scaffold NW_016094251.1 (2019499..2098139, complement)

Linkage Group LG4 - NC_051433.1Genomic Context describing neighboring genes Neighboring gene vesicular inhibitory amino acid transporter Neighboring gene rho GTPase-activating protein 40 Neighboring gene family with sequence similarity 210 member B Neighboring gene cytochrome c oxidase subunit NDUFA4 Neighboring gene serine hydroxymethyltransferase 2 (mitochondrial)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables enzyme inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein phosphatase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in establishment of endothelial barrier IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of sprouting angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein phosphatase 1 regulatory inhibitor subunit 16B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Kryptolebias marmoratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM164957v2 Primary Assembly

Genomic

  1. NC_051433.1 Reference ASM164957v2 Primary Assembly

    Range
    8582469..8667986
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017408878.3 → XP_017264367.1  protein phosphatase 1 regulatory inhibitor subunit 16B isoform X1

    UniProtKB/TrEMBL
    A0A3Q3ALX7
    Related
    ENSKMAP00010050385.1, ENSKMAT00010053984.1

  2. XM_037975371.1 → XP_037831299.1  protein phosphatase 1 regulatory inhibitor subunit 16B isoform X2

    Conserved Domains (2) summary
    PHA03095
    Location:77 → 307
    PHA03095; ankyrin-like protein; Provisional
    sd00045
    Location:77 → 104
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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