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dnm1a dynamin 1a [ Kryptolebias marmoratus (mangrove rivulus) ]

Gene ID: 108230982, updated on 10-Apr-2024

Summary

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Gene symbol
dnm1a
Gene description
dynamin 1a
See related
EnsemblRapid:ENSKMAG00010019252
Gene type
protein coding
RefSeq status
MODEL
Organism
Kryptolebias marmoratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Kryptolebias
Also known as
dnm1
Orthologs
zebrafish all
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Genomic context

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See dnm1a in Genome Data Viewer
Location:
chromosome: LG14
Exon count:
25
Annotation release Status Assembly LG Location
102 current ASM164957v2 (GCF_001649575.2) LG14 NC_051443.1 (15779152..15829045, complement)
101 previous assembly ASM164957v1 (GCF_001649575.1) Unplaced Scaffold NW_016094249.1 (5428831..5478710, complement)

Linkage Group LG14 - NC_051443.1Genomic Context describing neighboring genes Neighboring gene heat shock protein 5 Neighboring gene golgin A2 Neighboring gene cdkn1a interacting zinc finger protein 1a Neighboring gene bublin coiled coil protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dynamin-1a
Names
dynamin 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Kryptolebias marmoratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM164957v2 Primary Assembly

Genomic

  1. NC_051443.1 Reference ASM164957v2 Primary Assembly

    Range
    15779152..15829045 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017407650.3 → XP_017263139.1  dynamin-1a isoform X9

    UniProtKB/TrEMBL
    A0A3Q3BCN9

  2. XM_017407651.3 → XP_017263140.1  dynamin-1a isoform X4

    UniProtKB/TrEMBL
    A0A3Q3AYQ9
    Related
    ENSKMAP00010041617.1, ENSKMAT00010043999.1

  3. XM_017407647.3 → XP_017263136.1  dynamin-1a isoform X3

    UniProtKB/TrEMBL
    A0A3Q3AYQ9, A0A3Q3B0D8
    Related
    ENSKMAP00010041626.1, ENSKMAT00010044008.1

  4. XM_017407644.3 → XP_017263133.1  dynamin-1a isoform X1

    UniProtKB/TrEMBL
    A0A3Q3AYQ9, A0A3Q3B0U6

  5. XM_017407646.3 → XP_017263135.1  dynamin-1a isoform X2

    UniProtKB/TrEMBL
    A0A3Q3AYQ9, A0A3Q3BCT2

  6. XM_025004032.2 → XP_024859800.1  dynamin-1a isoform X5

    UniProtKB/TrEMBL
    A0A3Q3AYQ9
    Conserved Domains (4) summary
    smart00053
    Location:6 → 245
    DYNc; Dynamin, GTPase
    cd01256
    Location:530 → 639
    PH_dynamin; Dynamin pleckstrin homology (PH) domain
    pfam01031
    Location:216 → 501
    Dynamin_M; Dynamin central region
    pfam02212
    Location:668 → 756
    GED; Dynamin GTPase effector domain

  7. XM_037979466.1 → XP_037835394.1  dynamin-1a isoform X8

    UniProtKB/TrEMBL
    A0A3Q3BCN9
    Conserved Domains (4) summary
    smart00053
    Location:6 → 245
    DYNc; Dynamin, GTPase
    cd01256
    Location:514 → 625
    PH_dynamin; Dynamin pleckstrin homology (PH) domain
    pfam01031
    Location:216 → 502
    Dynamin_M; Dynamin central region
    pfam02212
    Location:649 → 737
    GED; Dynamin GTPase effector domain

  8. XM_037979465.1 → XP_037835393.1  dynamin-1a isoform X7

    UniProtKB/TrEMBL
    A0A3Q3BCN9
    Conserved Domains (4) summary
    smart00053
    Location:6 → 245
    DYNc; Dynamin, GTPase
    cd01256
    Location:514 → 625
    PH_dynamin; Dynamin pleckstrin homology (PH) domain
    pfam01031
    Location:216 → 502
    Dynamin_M; Dynamin central region
    pfam02212
    Location:654 → 742
    GED; Dynamin GTPase effector domain

  9. XM_037979464.1 → XP_037835392.1  dynamin-1a isoform X6

    UniProtKB/TrEMBL
    A0A3Q3BCN9
    Related
    ENSKMAP00010041613.1, ENSKMAT00010043995.1
    Conserved Domains (4) summary
    smart00053
    Location:6 → 245
    DYNc; Dynamin, GTPase
    cd01256
    Location:519 → 629
    PH_dynamin; Dynamin pleckstrin homology (PH) domain
    pfam01031
    Location:216 → 502
    Dynamin_M; Dynamin central region
    pfam02212
    Location:658 → 746
    GED; Dynamin GTPase effector domain
Nucleotide Protein
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