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trnas-aga transfer RNA serine (anticodon AGA) [ Danio rerio (zebrafish) ]

Gene ID: 108189540, updated on 13-Jun-2020

Summary

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Gene symbol
trnas-aga
Gene description
transfer RNA serine (anticodon AGA)
Gene type
tRNA
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104).
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Genomic context

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See trnas-aga in Genome Data Viewer
Location:
chromosome: 4
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 4 NC_007115.7 (54697228..54697309, complement)
106 current GRCz11 (GCF_000002035.6) Unplaced Scaffold NW_018394458.1 (38324..38405, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 4 NC_007115.6 (52767026..52767107, complement)

Chromosome 4 - NC_007115.7Genomic Context describing neighboring genes Neighboring gene oocyte zinc finger protein XlCOF6-like Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene transfer RNA histidin (anticodon GUG) Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene transfer RNA histidin (anticodon GUG)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007115.7 Reference GRCz11 Primary Assembly

    Range
    54697228..54697309 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 Primary Assembly

Genomic

  1. NW_018394458.1 Reference GRCz11 Primary Assembly

    Range
    38324..38405 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version