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    ppa inorganic pyrophosphatase [ Shigella flexneri 2a str. 2457T ]

    Gene ID: 1080735, updated on 8-May-2013
    Gene symbol
    ppa
    Gene description
    inorganic pyrophosphatase
    Locus tag
    S4527
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Shigella flexneri 2a str. 2457T (strain: 2457T, serotype: 2a)
    Lineage
    Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella
    Sequence :
    NC_004741.1 (4431046..4431576)

    NC_004741.1Genomic Context describing neighboring genes Neighboring gene ATP-binding component of a transport system Neighboring gene pseudo Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Complete genome sequence and comparative genomics of Shigella flexneri serotype 2a strain 2457T. Wei J, et al. Infect Immun, 2003 May. PMID 12704152.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Names
    inorganic pyrophosphatase
    NP_839655.1
    • catalyzes the hydrolysis of pyrophosphate to phosphate

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004741.1

      Range
      4431046..4431576
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_839655.1 inorganic pyrophosphatase [Shigella flexneri 2a str. 2457T]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      E3YB54
      UniProtKB/TrEMBL
      Q83P50
      Conserved Domains (1) summary
      cd00412
      Location:14 – 171
      Blast Score: 636
      pyrophosphatase; Inorganic pyrophosphatase. These enzymes hydrolyze inorganic pyrophosphate (PPi) to two molecules of orthophosphates (Pi). The reaction requires bivalent cations. The enzymes in general exist as homooligomers.
    Nucleotide Protein
    Heading Accession and Version
    genomic NZ_ADUV01000068.1 ZP_11534256.1
    genomic AE014073.1 AAP19467.1
    genomic ADUV01000068.1 EFS10884.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases

      Supplemental Content

      Table of contents

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      • BioProjects
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      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

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