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LOC107720747 transmembrane protein 39A [ Sinocyclocheilus rhinocerous ]

Gene ID: 107720747, updated on 28-Dec-2023

Summary

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Gene symbol
LOC107720747
Gene description
transmembrane protein 39A
See related
Ensembl:ENSSRHG00000040869
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus rhinocerous
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
Also known as
tmem39a
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current SAMN03320098_v1.1 (GCF_001515625.1) Unplaced Scaffold NW_015656671.1 (15376..44977)

NW_015656671.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107720746 Neighboring gene serine protease 23-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015656671.1 Unplaced Scaffold Reference SAMN03320098_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of autophagosome maturation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane protein 39A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus rhinocerous Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320098_v1.1 Primary Assembly

Genomic

  1. NW_015656671.1 Reference SAMN03320098_v1.1 Primary Assembly

    Range
    15376..44977
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016528572.1 → XP_016384058.1  transmembrane protein 39A isoform X1

    UniProtKB/TrEMBL
    A0A673LTA6, A0A673LY03
    Related
    ENSSRHP00000082591.1, ENSSRHT00000084822.1

  2. XM_016528573.1 → XP_016384059.1  transmembrane protein 39A isoform X2

    UniProtKB/TrEMBL
    A0A673LWF7
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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