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polr2i RNA polymerase II subunit I [ Sinocyclocheilus rhinocerous ]

Gene ID: 107711087, updated on 14-Mar-2024

Summary

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Gene symbol
polr2i
Gene description
RNA polymerase II subunit I
See related
Ensembl:ENSSRHG00000041971
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus rhinocerous
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current SAMN03320098_v1.1 (GCF_001515625.1) Unplaced Scaffold NW_015626129.1 (382936..387603)

NW_015626129.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 255B-like Neighboring gene uncharacterized LOC107711081 Neighboring gene uncharacterized LOC107711039 Neighboring gene peptidoglycan-recognition protein SC2-like Neighboring gene forkhead box protein G1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015626129.1 Unplaced Scaffold Reference SAMN03320098_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-directed 5'-3' RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in maintenance of transcriptional fidelity during transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription initiation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription-coupled nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase II, core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerase II subunit RPB9
Names
polymerase (RNA) II (DNA directed) polypeptide I
polymerase (RNA) II subunit I

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus rhinocerous Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320098_v1.1 Primary Assembly

Genomic

  1. NW_015626129.1 Reference SAMN03320098_v1.1 Primary Assembly

    Range
    382936..387603
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016516014.1 → XP_016371500.1  DNA-directed RNA polymerase II subunit RPB9

    UniProtKB/TrEMBL
    A0A673M694
    Related
    ENSSRHP00000084748.1, ENSSRHT00000087046.1
    Conserved Domains (2) summary
    COG1594
    Location:15 → 126
    RPB9; DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS [Transcription]
    cd10508
    Location:75 → 125
    Zn-ribbon_RPB9; C-terminal zinc ribbon domain of RPB9 subunit of RNA polymerase II
Nucleotide Protein
Heading Accession and Version

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