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nrde2 NRDE-2, necessary for RNA interference, domain containing [ Sinocyclocheilus anshuiensis ]

Gene ID: 107654848, updated on 14-Mar-2024

Summary

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Gene symbol
nrde2
Gene description
NRDE-2, necessary for RNA interference, domain containing
See related
Ensembl:ENSSANG00000006602
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus anshuiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
Orthologs
human zebrafish all
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Genomic context

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See nrde2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current SAMN03320099.WGS_v1.1 (GCF_001515605.1) Unplaced Scaffold NW_015548239.1 (526505..542636, complement)

NW_015548239.1Genomic Context describing neighboring genes Neighboring gene membrane-associated progesterone receptor component 2-like Neighboring gene la-related protein 1B-like Neighboring gene calmodulin Neighboring gene tetratricopeptide repeat protein 7B-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015548239.1 Unplaced Scaffold Reference SAMN03320099.WGS_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of RNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulatory ncRNA-mediated post-transcriptional gene silencing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein NRDE2 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus anshuiensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320099.WGS_v1.1 Primary Assembly

Genomic

  1. NW_015548239.1 Reference SAMN03320099.WGS_v1.1 Primary Assembly

    Range
    526505..542636 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016442124.1 → XP_016297610.1  protein NRDE2 homolog isoform X1

    UniProtKB/TrEMBL
    A0A671KZ13

  2. XM_016442125.1 → XP_016297611.1  protein NRDE2 homolog isoform X2

    UniProtKB/TrEMBL
    A0A671KZ08, A0A671KZ13
    Related
    ENSSANP00000012325.1, ENSSANT00000013178.1

  3. XM_016442123.1 → XP_016297609.1  protein NRDE2 homolog isoform X1

    UniProtKB/TrEMBL
    A0A671KZ13
Nucleotide Protein
Heading Accession and Version

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