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rae1 ribonucleic acid export 1 [ Sinocyclocheilus anshuiensis ]

Gene ID: 107654286, updated on 14-Mar-2024

Summary

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Gene symbol
rae1
Gene description
ribonucleic acid export 1
See related
Ensembl:ENSSANG00000049291
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus anshuiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current SAMN03320099.WGS_v1.1 (GCF_001515605.1) Unplaced Scaffold NW_015536644.1 (37039..58466, complement)

NW_015536644.1Genomic Context describing neighboring genes Neighboring gene NPR2 like, GATOR1 complex subunit Neighboring gene cytochrome b-c1 complex subunit 1, mitochondrial-like Neighboring gene uncharacterized LOC107654324

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015536644.1 Unplaced Scaffold Reference SAMN03320099.WGS_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mRNA export factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus anshuiensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320099.WGS_v1.1 Primary Assembly

Genomic

  1. NW_015536644.1 Reference SAMN03320099.WGS_v1.1 Primary Assembly

    Range
    37039..58466 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016441352.1 → XP_016296838.1  mRNA export factor isoform X2

    UniProtKB/TrEMBL
    A0A671ST33, A0A671SVN3
    Related
    ENSSANP00000100316.1, ENSSANT00000106494.1

  2. XM_016441314.1 → XP_016296800.1  mRNA export factor isoform X1

    UniProtKB/TrEMBL
    A0A671SVN3
    Related
    ENSSANP00000100320.1, ENSSANT00000106498.1

  3. XM_016441328.1 → XP_016296814.1  mRNA export factor isoform X1

    UniProtKB/TrEMBL
    A0A671SVN3

  4. XM_016441336.1 → XP_016296822.1  mRNA export factor isoform X1

    UniProtKB/TrEMBL
    A0A671SVN3

  5. XM_016441320.1 → XP_016296806.1  mRNA export factor isoform X1

    UniProtKB/TrEMBL
    A0A671SVN3

  6. XM_016441344.1 → XP_016296830.1  mRNA export factor isoform X1

    UniProtKB/TrEMBL
    A0A671SVN3
Nucleotide Protein
Heading Accession and Version

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