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spag6 sperm associated antigen 6 [ Sinocyclocheilus grahami ]

Gene ID: 107595127, updated on 14-Mar-2024

Summary

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Gene symbol
spag6
Gene description
sperm associated antigen 6
See related
Ensembl:ENSSGRG00000028466
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus grahami
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
Orthologs
human zebrafish all
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Genomic context

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See spag6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current SAMN03320097.WGS_v1.1 (GCF_001515645.1) Unplaced Scaffold NW_015505376.1 (416724..424659)

NW_015505376.1Genomic Context describing neighboring genes Neighboring gene COMM domain containing 3 Neighboring gene bmi1 polycomb ring finger oncogene 1a Neighboring gene polycystin 1 like 1, transient receptor potential channel interacting Neighboring gene protein disulfide-isomerase A4-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015505376.1 Unplaced Scaffold Reference SAMN03320097.WGS_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in epithelial cilium movement involved in extracellular fluid movement IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in filopodium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron projection extension IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sperm axoneme assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in acrosomal vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in axoneme IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sperm principal piece IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sperm-associated antigen 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus grahami Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320097.WGS_v1.1 Primary Assembly

Genomic

  1. NW_015505376.1 Reference SAMN03320097.WGS_v1.1 Primary Assembly

    Range
    416724..424659
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016285446.1 → XP_016140932.1  sperm-associated antigen 6 isoform X4

    UniProtKB/TrEMBL
    A0A672NZU7

  2. XM_016285443.1 → XP_016140929.1  sperm-associated antigen 6 isoform X1

    UniProtKB/TrEMBL
    A0A672NZU7

  3. XM_016285444.1 → XP_016140930.1  sperm-associated antigen 6 isoform X2

    UniProtKB/TrEMBL
    A0A672NTQ2, A0A672NZU7
    Related
    ENSSGRP00000054065.1, ENSSGRT00000057762.1

  4. XM_016285445.1 → XP_016140931.1  sperm-associated antigen 6 isoform X3

    UniProtKB/TrEMBL
    A0A672NZU7
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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