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palb2 partner and localizer of BRCA2 [ Sinocyclocheilus grahami ]

Gene ID: 107564487, updated on 14-Mar-2024

Summary

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Gene symbol
palb2
Gene description
partner and localizer of BRCA2
See related
Ensembl:ENSSGRG00000011882
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus grahami
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current SAMN03320097.WGS_v1.1 (GCF_001515645.1) Unplaced Scaffold NW_015505204.1 (4303469..4311864)

NW_015505204.1Genomic Context describing neighboring genes Neighboring gene polo like kinase 1 Neighboring gene RASD family member 3 Neighboring gene NADH:ubiquinone oxidoreductase subunit AB1a Neighboring gene mucin-12-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015505204.1 Unplaced Scaffold Reference SAMN03320097.WGS_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
partner and localizer of BRCA2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus grahami Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320097.WGS_v1.1 Primary Assembly

Genomic

  1. NW_015505204.1 Reference SAMN03320097.WGS_v1.1 Primary Assembly

    Range
    4303469..4311864
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016249591.1 → XP_016105077.1  partner and localizer of BRCA2 isoform X2

    UniProtKB/TrEMBL
    A0A672L2A3, A0A672LAL4
    Related
    ENSSGRP00000019608.1, ENSSGRT00000021184.1

  2. XM_016249598.1 → XP_016105084.1  partner and localizer of BRCA2 isoform X2

    UniProtKB/TrEMBL
    A0A672L2A3, A0A672LAL4

  3. XM_016249583.1 → XP_016105069.1  partner and localizer of BRCA2 isoform X1

    UniProtKB/TrEMBL
    A0A672L2A3
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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