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LOC107555030 TNF alpha induced protein 6 [ Sinocyclocheilus grahami ]

Gene ID: 107555030, updated on 9-Nov-2023

Summary

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Gene symbol
LOC107555030
Gene description
TNF alpha induced protein 6
See related
Ensembl:ENSSGRG00000034825
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus grahami
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
Also known as
tnfaip6
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Genomic context

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See LOC107555030 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current SAMN03320097.WGS_v1.1 (GCF_001515645.1) Unplaced Scaffold NW_015505702.1 (282070..288259)

NW_015505702.1Genomic Context describing neighboring genes Neighboring gene RNA-binding protein 44-like Neighboring gene RNA-binding protein 44-like Neighboring gene integrin subunit beta 5 Neighboring gene replication timing regulatory factor 1 Neighboring gene nebulin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015505702.1 Unplaced Scaffold Reference SAMN03320097.WGS_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hyaluronic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tumor necrosis factor-inducible gene 6 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus grahami Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320097.WGS_v1.1 Primary Assembly

Genomic

  1. NW_015505702.1 Reference SAMN03320097.WGS_v1.1 Primary Assembly

    Range
    282070..288259
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016237714.1 → XP_016093200.1  tumor necrosis factor-inducible gene 6 protein

    UniProtKB/TrEMBL
    A0A672Q2M1
    Related
    ENSSGRP00000067895.1, ENSSGRT00000072369.1
Nucleotide Protein
Heading Accession and Version

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