U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SLF1 SMC5-SMC6 complex localization factor 1 [ Miniopterus natalensis ]

Gene ID: 107539597, updated on 30-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SLF1
Gene description
SMC5-SMC6 complex localization factor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Miniopterus natalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Miniopteridae; Miniopterus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current Mnat.v1 (GCF_001595765.1) Unplaced Scaffold NW_015504626.1 (3713385..3774083, complement)

NW_015504626.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 81 member B Neighboring gene multiple C2 and transmembrane domain containing 1 Neighboring gene 60S ribosomal protein L35 pseudogene Neighboring gene KIAA0825 ortholog Neighboring gene ARB2 cotranscriptional regulator A Neighboring gene uncharacterized LOC107539600

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_015504626.1 Unplaced Scaffold Reference Mnat.v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of double-strand break repair IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
SMC5-SMC6 complex localization factor protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Miniopterus natalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnat.v1

Genomic

  1. NW_015504626.1 Reference Mnat.v1

    Range
    3713385..3774083 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016216142.1 → XP_016071628.1  SMC5-SMC6 complex localization factor protein 1 isoform X1

    Conserved Domains (4) summary
    cd00027
    Location:15 → 78
    BRCT; Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo ...
    cd00204
    Location:804 → 925
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:812 → 905
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:808 → 839
    ANK; ANK repeat [structural motif]

  2. XM_016216144.1 → XP_016071630.1  SMC5-SMC6 complex localization factor protein 1 isoform X2

    Conserved Domains (4) summary
    cd00027
    Location:15 → 78
    BRCT; Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo ...
    cd00204
    Location:780 → 901
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:788 → 881
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:784 → 815
    ANK; ANK repeat [structural motif]

  3. XM_016216143.1 → XP_016071629.1  SMC5-SMC6 complex localization factor protein 1 isoform X1

    Conserved Domains (4) summary
    cd00027
    Location:15 → 78
    BRCT; Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo ...
    cd00204
    Location:804 → 925
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:812 → 905
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:808 → 839
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.