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ETV6 ETS variant transcription factor 6 [ Rousettus aegyptiacus (Egyptian rousette) ]

Gene ID: 107516543, updated on 30-Mar-2024

Summary

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Gene symbol
ETV6
Gene description
ETS variant transcription factor 6
Locus tag
HJG63_004662
Gene type
protein coding
RefSeq status
MODEL
Organism
Rousettus aegyptiacus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Rousettinae; Rousettus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current mRouAeg1.p (GCF_014176215.1) Unplaced Scaffold NW_023416295.1 (153335851..153545947, complement)
100 previous assembly Raegyp2.0 (GCF_001466805.2) Unplaced Scaffold NW_015494625.1 (501100..716103)

NW_023416295.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene LDL receptor related protein 6 Neighboring gene BCL2 like 14 Neighboring gene 5S ribosomal RNA Neighboring gene uncharacterized LOC118613714 Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor ETV6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rousettus aegyptiacus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRouAeg1.p

Genomic

  1. NW_023416295.1 Reference mRouAeg1.p

    Range
    153335851..153545947 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016156364.2 → XP_016011850.1  transcription factor ETV6 isoform X1

    UniProtKB/TrEMBL
    A0A7J8JD29
    Conserved Domains (2) summary
    cd08535
    Location:56 → 123
    SAM_PNT-Tel_Yan; Sterile alpha motif (SAM)/Pointed domain of Tel/Yan protein
    smart00413
    Location:338 → 424
    ETS; erythroblast transformation specific domain

  2. XM_036237040.1 → XP_036092933.1  transcription factor ETV6 isoform X3

    Conserved Domains (2) summary
    cd08535
    Location:47 → 114
    SAM_PNT-Tel_Yan; Sterile alpha motif (SAM)/Pointed domain of Tel/Yan protein
    smart00413
    Location:329 → 415
    ETS; erythroblast transformation specific domain

  3. XM_036237039.1 → XP_036092932.1  transcription factor ETV6 isoform X3

    Conserved Domains (2) summary
    cd08535
    Location:47 → 114
    SAM_PNT-Tel_Yan; Sterile alpha motif (SAM)/Pointed domain of Tel/Yan protein
    smart00413
    Location:329 → 415
    ETS; erythroblast transformation specific domain

  4. XM_036237038.1 → XP_036092931.1  transcription factor ETV6 isoform X2

    Conserved Domains (2) summary
    cd08535
    Location:55 → 122
    SAM_PNT-Tel_Yan; Sterile alpha motif (SAM)/Pointed domain of Tel/Yan protein
    smart00413
    Location:337 → 423
    ETS; erythroblast transformation specific domain

  5. XM_036237041.1 → XP_036092934.1  transcription factor ETV6 isoform X3

    Conserved Domains (2) summary
    cd08535
    Location:47 → 114
    SAM_PNT-Tel_Yan; Sterile alpha motif (SAM)/Pointed domain of Tel/Yan protein
    smart00413
    Location:329 → 415
    ETS; erythroblast transformation specific domain
Nucleotide Protein
Heading Accession and Version

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