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TRIM3 tripartite motif containing 3 [ Rousettus aegyptiacus (Egyptian rousette) ]

Gene ID: 107504379, updated on 30-Mar-2024

Summary

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Gene symbol
TRIM3
Gene description
tripartite motif containing 3
Locus tag
HJG63_019866
Gene type
protein coding
RefSeq status
MODEL
Organism
Rousettus aegyptiacus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Rousettinae; Rousettus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current mRouAeg1.p (GCF_014176215.1) Unplaced Scaffold NW_023416308.1 (79979989..80005551, complement)
100 previous assembly Raegyp2.0 (GCF_001466805.2) Unplaced Scaffold NW_015495296.1 (130826..156404)

NW_023416308.1Genomic Context describing neighboring genes Neighboring gene amyloid beta precursor protein binding family B member 1 Neighboring gene uncharacterized LOC107504373 Neighboring gene hemopexin Neighboring gene ADP ribosylation factor interacting protein 2 Neighboring gene translocase of inner mitochondrial membrane 10B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation repressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tripartite motif-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rousettus aegyptiacus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRouAeg1.p

Genomic

  1. NW_023416308.1 Reference mRouAeg1.p

    Range
    79979989..80005551 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036221111.1 → XP_036077004.1  tripartite motif-containing protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A7J8H809, A0A7J8H838
    Conserved Domains (5) summary
    smart00502
    Location:158 → 284
    BBC; B-Box C-terminal domain
    smart00557
    Location:322 → 419
    IG_FLMN; Filamin-type immunoglobulin domains
    cd14960
    Location:471 → 744
    NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
    cd16768
    Location:19 → 63
    RING-HC_TRIM3; RING finger, HC subclass, found in tripartite motif-containing protein 3 (TRIM3)
    cd19825
    Location:107 → 153
    Bbox2_TRIM3_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 3 (TRIM3)

  2. XM_016133527.2 → XP_015989013.1  tripartite motif-containing protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A7J8H809
    Conserved Domains (6) summary
    smart00502
    Location:63 → 189
    BBC; B-Box C-terminal domain
    smart00336
    Location:26 → 56
    BBOX; B-Box-type zinc finger
    smart00557
    Location:227 → 324
    IG_FLMN; Filamin-type immunoglobulin domains
    COG3391
    Location:391 → 640
    YncE; DNA-binding beta-propeller fold protein YncE [General function prediction only]
    cd14960
    Location:376 → 649
    NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
    pfam00630
    Location:227 → 320
    Filamin; Filamin/ABP280 repeat

  3. XM_016133525.2 → XP_015989011.1  tripartite motif-containing protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A7J8H809, A0A7J8H838
    Conserved Domains (5) summary
    smart00502
    Location:158 → 284
    BBC; B-Box C-terminal domain
    smart00557
    Location:322 → 419
    IG_FLMN; Filamin-type immunoglobulin domains
    cd14960
    Location:471 → 744
    NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
    cd16768
    Location:19 → 63
    RING-HC_TRIM3; RING finger, HC subclass, found in tripartite motif-containing protein 3 (TRIM3)
    cd19825
    Location:107 → 153
    Bbox2_TRIM3_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 3 (TRIM3)

  4. XM_016133524.2 → XP_015989010.1  tripartite motif-containing protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A7J8H809, A0A7J8H838
    Conserved Domains (5) summary
    smart00502
    Location:158 → 284
    BBC; B-Box C-terminal domain
    smart00557
    Location:322 → 419
    IG_FLMN; Filamin-type immunoglobulin domains
    cd14960
    Location:471 → 744
    NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
    cd16768
    Location:19 → 63
    RING-HC_TRIM3; RING finger, HC subclass, found in tripartite motif-containing protein 3 (TRIM3)
    cd19825
    Location:107 → 153
    Bbox2_TRIM3_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 3 (TRIM3)
Nucleotide Protein
Heading Accession and Version

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