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LOC107396911 zinc finger and BTB domain-containing protein 11 [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107396911, updated on 16-Nov-2023

Summary

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Gene symbol
LOC107396911
Gene description
zinc finger and BTB domain-containing protein 11
See related
Ensembl:ENSNFUG00015015995
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Also known as
zbtb11
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026540021.1 (18140..36702)
100 previous assembly Nfu_20140520 (GCF_001465895.1) Unplaced Scaffold NW_015444112.1 (18728..36040)

NW_026540021.1Genomic Context describing neighboring genes Neighboring gene tumor protein p63 Neighboring gene tumor protein p63 regulated 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: zinc finger and BTB domain-containing protein 11
Names
zinc finger and BTB domain containing 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026540021.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    18140..36702
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015976755.2 → XP_015832241.2  LOW QUALITY PROTEIN: zinc finger and BTB domain-containing protein 11

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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