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l2hgdh L-2-hydroxyglutarate dehydrogenase [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107391749, updated on 14-Mar-2024

Summary

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Gene symbol
l2hgdh
Gene description
L-2-hydroxyglutarate dehydrogenase
See related
Ensembl:ENSNFUG00015012168
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Orthologs
human zebrafish all
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Genomic context

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See l2hgdh in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539918.1 (19660854..19665830)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr16 NC_029664.1 (18454058..18458981, complement)

NW_026539918.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase kinase kinase kinase 5 Neighboring gene uncharacterized LOC107391772 Neighboring gene uncharacterized LOC107391770 Neighboring gene cyclin-dependent kinase-like 1 (CDC2-related kinase) Neighboring gene distal membrane arm assembly component 2 like Neighboring gene son of sevenless homolog 2 (Drosophila) Neighboring gene uncharacterized LOC107391744

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables (S)-2-hydroxy-acid oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables 2-hydroxyglutarate dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
L-2-hydroxyglutarate dehydrogenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539918.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    19660854..19665830
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015969196.2 → XP_015824682.2  L-2-hydroxyglutarate dehydrogenase, mitochondrial

Nucleotide Protein
Heading Accession and Version

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