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klhl21 kelch-like family member 21 [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107390431, updated on 14-Mar-2024

Summary

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Gene symbol
klhl21
Gene description
kelch-like family member 21
See related
Ensembl:ENSNFUG00015005107
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539923.1 (5112858..5134510, complement)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr15 NC_029663.1 (5540355..5559204, complement)

NW_026539923.1Genomic Context describing neighboring genes Neighboring gene pleckstrin homology domain containing, family G (with RhoGef domain) member 5b Neighboring gene nucleolar protein 9 Neighboring gene zinc finger and BTB domain containing 48 Neighboring gene P2Y purinoceptor 1 Neighboring gene integrator complex subunit 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kelch-like protein 21

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539923.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    5112858..5134510 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015967125.2 → XP_015822611.1  kelch-like protein 21

    UniProtKB/TrEMBL
    A0A1A8A0C8
    Related
    ENSNFUP00015010373.1
    Conserved Domains (4) summary
    PHA03098
    Location:35 → 549
    PHA03098; kelch-like protein; Provisional
    sd00038
    Location:328 → 370
    Kelch; KELCH repeat [structural motif]
    cd18250
    Location:17 → 140
    BTB_POZ_KLHL21; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in Kelch-like protein 21 (KLHL21)
    cd18460
    Location:135 → 235
    BACK_KLHL21; BACK (BTB and C-terminal Kelch) domain found in Kelch-like protein 21 (KLHL21)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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