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neb nebulin [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107389650, updated on 14-Mar-2024

Summary

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Gene symbol
neb
Gene description
nebulin
See related
Ensembl:ENSNFUG00015005255
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
142
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539924.1 (14982923..15058434, complement)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr14 NC_029662.1 (16992651..17072194, complement)

NW_026539924.1Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 8 Neighboring gene phosducin-like 3 Neighboring gene neuromedin S Neighboring gene ADP-ribosylation factor-like 5A Neighboring gene calcium channel, voltage-dependent, beta 4a subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cardiac muscle thin filament assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Z disc IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nebulin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539924.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    14982923..15058434 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054746639.1 → XP_054602614.1  nebulin isoform X3

  2. XM_054746649.1 → XP_054602624.1  nebulin isoform X13

  3. XM_054746640.1 → XP_054602615.1  nebulin isoform X4

  4. XM_054746645.1 → XP_054602620.1  nebulin isoform X9

  5. XM_054746646.1 → XP_054602621.1  nebulin isoform X10

  6. XM_054746642.1 → XP_054602617.1  nebulin isoform X6

  7. XM_054746643.1 → XP_054602618.1  nebulin isoform X7

  8. XM_054746637.1 → XP_054602612.1  nebulin isoform X1

  9. XM_054746641.1 → XP_054602616.1  nebulin isoform X5

  10. XM_054746654.1 → XP_054602629.1  nebulin isoform X18

  11. XM_054746650.1 → XP_054602625.1  nebulin isoform X14

  12. XM_054746644.1 → XP_054602619.1  nebulin isoform X8

  13. XM_054746651.1 → XP_054602626.1  nebulin isoform X15

  14. XM_054746653.1 → XP_054602628.1  nebulin isoform X17

  15. XM_054746660.1 → XP_054602635.1  nebulin isoform X24

  16. XM_054746658.1 → XP_054602633.1  nebulin isoform X22

  17. XM_054746659.1 → XP_054602634.1  nebulin isoform X23

  18. XM_054746657.1 → XP_054602632.1  nebulin isoform X21

  19. XM_054746656.1 → XP_054602631.1  nebulin isoform X20

  20. XM_054746655.1 → XP_054602630.1  nebulin isoform X19

  21. XM_054746652.1 → XP_054602627.1  nebulin isoform X16

  22. XM_054746647.1 → XP_054602622.1  nebulin isoform X11

  23. XM_054746648.1 → XP_054602623.1  nebulin isoform X12

  24. XM_054746638.1 → XP_054602613.1  nebulin isoform X2

  25. XM_054746661.1 → XP_054602636.1  nebulin isoform X25

Nucleotide Protein
Heading Accession and Version

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