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bnc2 basonuclin zinc finger protein 2 [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107389152, updated on 14-Mar-2024

Summary

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Gene symbol
bnc2
Gene description
basonuclin zinc finger protein 2
See related
Ensembl:ENSNFUG00015005160
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Orthologs
human zebrafish all
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Genomic context

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See bnc2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539921.1 (14467709..14684709)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr02 NC_029650.1 (15812176..15912289)

NW_026539921.1Genomic Context describing neighboring genes Neighboring gene SH3 domain containing GRB2 like 2a, endophilin A1 Neighboring gene uncharacterized LOC107389168 Neighboring gene centlein, centrosomal protein Neighboring gene PC4 and SFRS1 interacting protein 1a Neighboring gene small nuclear RNA activating complex, polypeptide 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein basonuclin-2
Names
basonuclin 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539921.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    14467709..14684709
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054743680.1 → XP_054599655.1  zinc finger protein basonuclin-2 isoform X2

    UniProtKB/TrEMBL
    A0A8C6KSV9

  2. XM_015965154.2 → XP_015820640.1  zinc finger protein basonuclin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8C6KSV9
    Related
    ENSNFUP00015010463.1
    Conserved Domains (1) summary
    sd00017
    Location:1233 → 1254
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_054743681.1 → XP_054599656.1  zinc finger protein basonuclin-2 isoform X3

    UniProtKB/TrEMBL
    A0A8C6KSN0
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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