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odr4 odr-4 GPCR localization factor homolog [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107384174, updated on 14-Mar-2024

Summary

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Gene symbol
odr4
Gene description
odr-4 GPCR localization factor homolog
See related
Ensembl:ENSNFUG00015023001
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Also known as
C2H1ORF27; csgr09h1orf27
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539914.1 (11975715..11982269, complement)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr09 NC_029657.1 (44242214..44248748)

NW_026539914.1Genomic Context describing neighboring genes Neighboring gene polypyrimidine tract binding protein 2b Neighboring gene dihydropyrimidine dehydrogenase b Neighboring gene translocated promoter region a, nuclear basket protein Neighboring gene proteoglycan 4a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein odr-4 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539914.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    11975715..11982269 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054738746.1 → XP_054594721.1  protein odr-4 homolog isoform X2

  2. XM_015957263.2 → XP_015812749.1  protein odr-4 homolog isoform X1

    UniProtKB/TrEMBL
    A0A1A7ZU92
    Related
    ENSNFUP00015048794.1
    Conserved Domains (1) summary
    pfam14778
    Location:28 → 369
    ODR4-like; Olfactory receptor 4-like
Nucleotide Protein
Heading Accession and Version

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