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rock1 Rho-associated, coiled-coil containing protein kinase 1 [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107383841, updated on 3-Apr-2024

Summary

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Gene symbol
rock1
Gene description
Rho-associated, coiled-coil containing protein kinase 1
See related
Ensembl:ENSNFUG00015009976
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
34
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539914.1 (22054156..22117420, complement)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr09 NC_029657.1 (32438599..32499344)

NW_026539914.1Genomic Context describing neighboring genes Neighboring gene THO complex 1 Neighboring gene ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) Neighboring gene uncharacterized LOC129163519 Neighboring gene GREB1 like retinoic acid receptor coactivator Neighboring gene abhydrolase domain containing 3, phospholipase Neighboring gene MIB E3 ubiquitin protein ligase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Rho-dependent protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Rho protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in actomyosin structure organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cortical actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in embryonic morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cytokinesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-threonine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rho-associated protein kinase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539914.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    22054156..22117420 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054741353.1 → XP_054597328.1  rho-associated protein kinase 1 isoform X2

    UniProtKB/TrEMBL
    A0A1A8UDN7

  2. XM_054741348.1 → XP_054597323.1  rho-associated protein kinase 1 isoform X1

    UniProtKB/TrEMBL
    A0A1A8APP7

  3. XM_054741358.1 → XP_054597333.1  rho-associated protein kinase 1 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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