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mical2a microtubule associated monooxygenase, calponin and LIM domain containing 2a [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107381406, updated on 3-Apr-2024

Summary

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Gene symbol
mical2a
Gene description
microtubule associated monooxygenase, calponin and LIM domain containing 2a
See related
Ensembl:ENSNFUG00015008743
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Also known as
mical2
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
27
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539934.1 (16686266..16745623, complement)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr07 NC_029655.1 (19485161..19549405, complement)

NW_026539934.1Genomic Context describing neighboring genes Neighboring gene BTB (POZ) domain containing 10b Neighboring gene ras association domain-containing protein 10 Neighboring gene TEA domain family member 1b Neighboring gene uncharacterized LOC107381404 Neighboring gene glucose-fructose oxidoreductase domain containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-actin-monooxygenase MICAL2; F-actin-monooxygenase mical2b
Names
microtubule associated monooxygenase, calponin and LIM domain containing 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539934.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    16686266..16745623 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054732078.1 → XP_054588053.1  F-actin-monooxygenase MICAL2 isoform X4

  2. XM_054732077.1 → XP_054588052.1  F-actin-monooxygenase MICAL2 isoform X4

  3. XM_054732074.1 → XP_054588049.1  F-actin-monooxygenase MICAL2 isoform X1

  4. XM_054732075.1 → XP_054588050.1  F-actin-monooxygenase MICAL2 isoform X2

  5. XM_054732076.1 → XP_054588051.1  F-actin-monooxygenase mical2b isoform X3

  6. XM_015953051.2 → XP_015808537.1  F-actin-monooxygenase MICAL2 isoform X5

    UniProtKB/TrEMBL
    A0A8C6LGG0, A0A9D2Y1T5
    Related
    ENSNFUP00015018412.1
    Conserved Domains (3) summary
    cl30692
    Location:86 → 225
    UbiH; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]
    cl00030
    Location:513 → 622
    CH_SF; calponin homology (CH) domain superfamily
    cl02475
    Location:742 → 796
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

  7. XM_054732073.1 → XP_054588048.1  F-actin-monooxygenase MICAL2 isoform X1

  8. XM_054732072.1 → XP_054588047.1  F-actin-monooxygenase MICAL2 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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