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mbnl2 muscleblind-like splicing regulator 2 [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107381086, updated on 3-Apr-2024

Summary

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Gene symbol
mbnl2
Gene description
muscleblind-like splicing regulator 2
See related
Ensembl:ENSNFUG00015022750
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539919.1 (47775518..47834800)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr06 NC_029654.1 (55179902..55239049)

NW_026539919.1Genomic Context describing neighboring genes Neighboring gene par-3 family cell polarity regulator beta a Neighboring gene zona pellucida sperm-binding protein 3 Neighboring gene ras-related protein Rap-2a Neighboring gene mitochondrial ribosomal protein L39

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
muscleblind-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539919.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    47775518..47834800
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015952600.2 → XP_015808086.1  muscleblind-like protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C6VXV9, A0A9D2Y819
    Conserved Domains (1) summary
    smart00356
    Location:178 → 202
    ZnF_C3H1; zinc finger

  2. XM_015952601.2 → XP_015808087.1  muscleblind-like protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C6VXV9, A0A9D2Y6I7
    Conserved Domains (1) summary
    smart00356
    Location:178 → 202
    ZnF_C3H1; zinc finger

  3. XM_015952605.2 → XP_015808091.1  muscleblind-like protein 2 isoform X6

    UniProtKB/TrEMBL
    A0A8C6VXV9, A0A9D3BNE2
    Conserved Domains (1) summary
    smart00356
    Location:178 → 202
    ZnF_C3H1; zinc finger

  4. XM_015952599.2 → XP_015808085.1  muscleblind-like protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C6VXV9, A0A9D2Y819
    Conserved Domains (1) summary
    smart00356
    Location:178 → 202
    ZnF_C3H1; zinc finger

  5. XM_015952603.2 → XP_015808089.1  muscleblind-like protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A8C6VXV9, A0A8C6VY19
    Related
    ENSNFUP00015048302.1
    Conserved Domains (1) summary
    smart00356
    Location:178 → 202
    ZnF_C3H1; zinc finger

  6. XM_015952607.2 → XP_015808093.1  muscleblind-like protein 2 isoform X9

    UniProtKB/TrEMBL
    A0A8C6VXV9, A0A9D3BPC5
    Conserved Domains (1) summary
    smart00356
    Location:178 → 202
    ZnF_C3H1; zinc finger

  7. XM_015952602.2 → XP_015808088.1  muscleblind-like protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A8C6VXV5, A0A8C6VXV9
    Related
    ENSNFUP00015048288.1
    Conserved Domains (1) summary
    smart00356
    Location:178 → 202
    ZnF_C3H1; zinc finger

  8. XM_015952606.2 → XP_015808092.1  muscleblind-like protein 2 isoform X7

    UniProtKB/TrEMBL
    A0A1A7ZYG1, A0A8C6VXV9
    Conserved Domains (1) summary
    smart00356
    Location:178 → 202
    ZnF_C3H1; zinc finger

  9. XM_015952609.2 → XP_015808095.1  muscleblind-like protein 2 isoform X11

    UniProtKB/TrEMBL
    A0A8C6VXV9, A0A9D2Y6N6
    Conserved Domains (1) summary
    smart00356
    Location:178 → 202
    ZnF_C3H1; zinc finger

  10. XM_015952604.2 → XP_015808090.1  muscleblind-like protein 2 isoform X5

    UniProtKB/TrEMBL
    A0A8C6VXV9, A0A9D2Y8Z1
    Related
    ENSNFUP00015048296.1
    Conserved Domains (1) summary
    smart00356
    Location:178 → 202
    ZnF_C3H1; zinc finger

  11. XM_015952608.2 → XP_015808094.1  muscleblind-like protein 2 isoform X10

    UniProtKB/TrEMBL
    A0A8C6VXV9, A0A9D2Y687
    Conserved Domains (1) summary
    smart00356
    Location:178 → 202
    ZnF_C3H1; zinc finger

  12. XM_015952610.2 → XP_015808096.1  muscleblind-like protein 2 isoform X12

    UniProtKB/TrEMBL
    A0A8C6VXV9, A0A9D2Y7G0
    Conserved Domains (1) summary
    smart00356
    Location:178 → 202
    ZnF_C3H1; zinc finger

  13. XM_054743140.1 → XP_054599115.1  muscleblind-like protein 2 isoform X8

    UniProtKB/TrEMBL
    A0A8C6PTP6
Nucleotide Protein
Heading Accession and Version

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