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LOC107375096 integral membrane protein 2A [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107375096, updated on 16-Nov-2023

Summary

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Gene symbol
LOC107375096
Gene description
integral membrane protein 2A
See related
Ensembl:ENSNFUG00015002514
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Also known as
itm2a
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539916.1 (3419524..3443582, complement)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr01 NC_029649.1 (4237550..4262538, complement)

NW_026539916.1Genomic Context describing neighboring genes Neighboring gene putative P2Y purinoceptor 10 Neighboring gene G protein-coupled receptor 174 Neighboring gene uncharacterized LOC129161833 Neighboring gene T-box transcription factor 22

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables amyloid-beta binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of amyloid precursor protein biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integral membrane protein 2A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539916.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    3419524..3443582 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015943491.2 → XP_015798977.1  integral membrane protein 2A

    UniProtKB/TrEMBL
    A0A1A8A4C5, A0A8C6KFW9
    Related
    ENSNFUP00015005047.1
    Conserved Domains (1) summary
    smart01039
    Location:117 → 209
    BRICHOS; The BRICHOS domain is found in a variety of proteins implicated in dementia, respiratory distress and cancer
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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