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    BT_4501 ribosomal large subunit pseudouridine synthase A [ Bacteroides thetaiotaomicron VPI-5482 ]

    Gene ID: 1073696, updated on 18-May-2013
    Gene symbol
    BT_4501
    Gene description
    ribosomal large subunit pseudouridine synthase A
    Locus tag
    BT_4501
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bacteroides thetaiotaomicron VPI-5482 (strain: VPI-5482)
    Lineage
    Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
    Sequence :
    NC_004663.1 (5916372..5918021, complement)

    NC_004663.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. A genomic view of the human-Bacteroides thetaiotaomicron symbiosis. Xu J, et al. Science, 2003 Mar 28. PMID 12663928.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Names
    ribosomal large subunit pseudouridine synthase A

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004663.1

      Range
      5916372..5918021, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_813412.1 ribosomal large subunit pseudouridine synthase A [Bacteroides thetaiotaomicron VPI-5482]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q89Z76
      Conserved Domains (2) summary
      cd02869
      Location:350 – 532
      Blast Score: 480
      PseudoU_synth_RluCD_like; Pseudouridine synthase, RsuA/RluD family
      COG0564
      Location:340 – 544
      Blast Score: 565
      RluA; Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version
    genomic AE015928.1 AAO79606.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • GEO Profiles
        Related GEO
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

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