U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PIPOX pipecolic acid and sarcosine oxidase [ Coturnix japonica (Japanese quail) ]

Gene ID: 107322645, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
PIPOX
Gene description
pipecolic acid and sarcosine oxidase
See related
Ensembl:ENSCJPG00005011994
Gene type
protein coding
RefSeq status
MODEL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 19
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Coturnix japonica 2.1 (GCF_001577835.2) 19 NC_029534.1 (4707580..4711687)

Chromosome 19 - NC_029534.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116654239 Neighboring gene PHD finger protein 12 Neighboring gene seizure related 6 homolog Neighboring gene myosin XVIIIA Neighboring gene crystallin beta A1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_029534.1 Chromosome 19 Reference Coturnix japonica 2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-pipecolate oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sarcosine oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-lysine catabolic process to acetyl-CoA via L-pipecolate IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
peroxisomal sarcosine oxidase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.1 Primary Assembly

Genomic

  1. NC_029534.1 Reference Coturnix japonica 2.1 Primary Assembly

    Range
    4707580..4711687
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015880892.2 → XP_015736378.1  peroxisomal sarcosine oxidase

    UniProtKB/TrEMBL
    A0A8C2TJ71
    Related
    ENSCJPP00005014354.1, ENSCJPT00005020450.1
    Conserved Domains (2) summary
    TIGR01377
    Location:16 → 387
    soxA_mon; sarcosine oxidase, monomeric form
    cl21454
    Location:16 → 46
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.