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GTF3C1 general transcription factor IIIC subunit 1 [ Coturnix japonica (Japanese quail) ]

Gene ID: 107320933, updated on 14-Mar-2024

Summary

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Gene symbol
GTF3C1
Gene description
general transcription factor IIIC subunit 1
See related
Ensembl:ENSCJPG00005016094
Gene type
protein coding
RefSeq status
MODEL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
37
Annotation release Status Assembly Chr Location
101 current Coturnix japonica 2.1 (GCF_001577835.2) 14 NC_029529.1 (10597850..10623033)

Chromosome 14 - NC_029529.1Genomic Context describing neighboring genes Neighboring gene GSG1 like Neighboring gene uncharacterized LOC107320940 Neighboring gene katanin interacting protein Neighboring gene small nuclear ribonucleoprotein U11/U12 subunit 25 Neighboring gene RNA polymerase III subunit K

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029529.1 Chromosome 14 Reference Coturnix japonica 2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 5S class rRNA transcription by RNA polymerase III IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription initiation at RNA polymerase III promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIIIC complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
general transcription factor 3C polypeptide 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.1 Primary Assembly

Genomic

  1. NC_029529.1 Reference Coturnix japonica 2.1 Primary Assembly

    Range
    10597850..10623033
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015877290.2 → XP_015732776.1  general transcription factor 3C polypeptide 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2TXI4
    Conserved Domains (1) summary
    pfam04182
    Location:174 → 250
    B-block_TFIIIC; B-block binding subunit of TFIIIC

  2. XM_015877292.2 → XP_015732778.1  general transcription factor 3C polypeptide 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C2TXI4
    Conserved Domains (1) summary
    pfam04182
    Location:174 → 250
    B-block_TFIIIC; B-block binding subunit of TFIIIC

  3. XM_015877293.2 → XP_015732779.1  general transcription factor 3C polypeptide 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C2TXI4
    Related
    ENSCJPP00005020181.1, ENSCJPT00005027850.1
    Conserved Domains (1) summary
    pfam04182
    Location:174 → 250
    B-block_TFIIIC; B-block binding subunit of TFIIIC

  4. XM_015877295.2 → XP_015732781.1  general transcription factor 3C polypeptide 1 isoform X4

    Conserved Domains (1) summary
    cd16169
    Location:198 → 294
    Tau138_eWH; extended winged-helix domain of tau138 and related proteins
Nucleotide Protein
Heading Accession and Version

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