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TSHZ3 teashirt zinc finger homeobox 3 [ Coturnix japonica (Japanese quail) ]

Gene ID: 107319343, updated on 14-Mar-2024

Summary

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Gene symbol
TSHZ3
Gene description
teashirt zinc finger homeobox 3
See related
Ensembl:ENSCJPG00005014409
Gene type
protein coding
RefSeq status
MODEL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Coturnix japonica 2.1 (GCF_001577835.2) 11 NC_029526.1 (7921741..7990326, complement)

Chromosome 11 - NC_029526.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107319266 Neighboring gene uncharacterized LOC107319268 Neighboring gene uncharacterized LOC116653970 Neighboring gene uncharacterized LOC107319271

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029526.1 Chromosome 11 Reference Coturnix japonica 2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
teashirt homolog 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.1 Primary Assembly

Genomic

  1. NC_029526.1 Reference Coturnix japonica 2.1 Primary Assembly

    Range
    7921741..7990326 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015874084.2 → XP_015729570.1  teashirt homolog 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C2TRK7
    Conserved Domains (2) summary
    cd00086
    Location:819 → 887
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    sd00020
    Location:145 → 167
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_015874083.2 → XP_015729569.1  teashirt homolog 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C2TRK7, A0A8C2TRP1
    Related
    ENSCJPP00005017670.1, ENSCJPT00005024636.1
    Conserved Domains (2) summary
    cd00086
    Location:890 → 958
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    sd00020
    Location:216 → 238
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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