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TANK TRAF family member associated NFKB activator [ Coturnix japonica (Japanese quail) ]

Gene ID: 107316981, updated on 14-Mar-2024

Summary

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Gene symbol
TANK
Gene description
TRAF family member associated NFKB activator
See related
Ensembl:ENSCJPG00005014302
Gene type
protein coding
RefSeq status
MODEL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Coturnix japonica 2.1 (GCF_001577835.2) 7 NC_029522.1 (25213729..25238378)

Chromosome 7 - NC_029522.1Genomic Context describing neighboring genes Neighboring gene integrin subunit beta 6 Neighboring gene RNA binding motif single stranded interacting protein 1 Neighboring gene uncharacterized LOC107316985 Neighboring gene proteasome 26S subunit, non-ATPase 14 Neighboring gene T-box brain transcription factor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029522.1 Chromosome 7 Reference Coturnix japonica 2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TRAF family member-associated NF-kappa-B activator

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.1 Primary Assembly

Genomic

  1. NC_029522.1 Reference Coturnix japonica 2.1 Primary Assembly

    Range
    25213729..25238378
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015869126.2 → XP_015724612.1  TRAF family member-associated NF-kappa-B activator isoform X1

    UniProtKB/TrEMBL
    A0A8C2TRZ2, A0A8C2TV79
    Related
    ENSCJPP00005017547.1, ENSCJPT00005024435.1
    Conserved Domains (2) summary
    COG1196
    Location:3 → 172
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam12845
    Location:192 → 244
    TBD; TBD domain

  2. XM_032446020.1 → XP_032301911.1  TRAF family member-associated NF-kappa-B activator isoform X2

    Conserved Domains (2) summary
    COG1196
    Location:3 → 172
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam12845
    Location:192 → 244
    TBD; TBD domain

  3. XM_015869130.2 → XP_015724616.1  TRAF family member-associated NF-kappa-B activator isoform X1

    UniProtKB/TrEMBL
    A0A8C2TRZ2, A0A8C2TV79
    Conserved Domains (2) summary
    COG1196
    Location:3 → 172
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam12845
    Location:192 → 244
    TBD; TBD domain

  4. XM_015869129.2 → XP_015724615.1  TRAF family member-associated NF-kappa-B activator isoform X1

    UniProtKB/TrEMBL
    A0A8C2TRZ2, A0A8C2TV79
    Conserved Domains (2) summary
    COG1196
    Location:3 → 172
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam12845
    Location:192 → 244
    TBD; TBD domain

  5. XM_032446019.1 → XP_032301910.1  TRAF family member-associated NF-kappa-B activator isoform X1

    UniProtKB/TrEMBL
    A0A8C2TRZ2, A0A8C2TV79
    Related
    ENSCJPP00005017548.1, ENSCJPT00005024436.1
    Conserved Domains (2) summary
    COG1196
    Location:3 → 172
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam12845
    Location:192 → 244
    TBD; TBD domain

  6. XM_015869127.2 → XP_015724613.1  TRAF family member-associated NF-kappa-B activator isoform X1

    UniProtKB/TrEMBL
    A0A8C2TRZ2, A0A8C2TV79
    Conserved Domains (2) summary
    COG1196
    Location:3 → 172
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam12845
    Location:192 → 244
    TBD; TBD domain

  7. XM_015869131.2 → XP_015724617.1  TRAF family member-associated NF-kappa-B activator isoform X3

    UniProtKB/TrEMBL
    A0A8C2TV79
    Conserved Domains (1) summary
    pfam12845
    Location:156 → 208
    TBD; TBD domain
Nucleotide Protein
Heading Accession and Version

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