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IKZF5 IKAROS family zinc finger 5 [ Coturnix japonica (Japanese quail) ]

Gene ID: 107316258, updated on 14-Mar-2024

Summary

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Gene symbol
IKZF5
Gene description
IKAROS family zinc finger 5
See related
Ensembl:ENSCJPG00005020170
Gene type
protein coding
RefSeq status
MODEL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
Orthologs
human mouse all
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Genomic context

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See IKZF5 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Coturnix japonica 2.1 (GCF_001577835.2) 6 NC_029521.1 (27987808..27997129, complement)

Chromosome 6 - NC_029521.1Genomic Context describing neighboring genes Neighboring gene chromosome 6 C10orf88 homolog Neighboring gene disintegrin and metalloproteinase domain-containing protein 9-like Neighboring gene phosphoseryl-tRNA kinase Neighboring gene acyl-CoA dehydrogenase short/branched chain Neighboring gene H6 family homeobox 3 Neighboring gene H6 family homeobox 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029521.1 Chromosome 6 Reference Coturnix japonica 2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein Pegasus

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.1 Primary Assembly

Genomic

  1. NC_029521.1 Reference Coturnix japonica 2.1 Primary Assembly

    Range
    27987808..27997129 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015867535.2 → XP_015723021.1  zinc finger protein Pegasus

    UniProtKB/TrEMBL
    A0A8C2UCM6
    Related
    ENSCJPP00005025737.1, ENSCJPT00005034968.1
    Conserved Domains (2) summary
    sd00017
    Location:84 → 104
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:124 → 148
    zf-H2C2_2; Zinc-finger double domain

  2. XM_015867537.2 → XP_015723023.1  zinc finger protein Pegasus

    UniProtKB/TrEMBL
    A0A8C2UCM6
    Conserved Domains (2) summary
    sd00017
    Location:84 → 104
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:124 → 148
    zf-H2C2_2; Zinc-finger double domain

  3. XM_015867538.2 → XP_015723024.1  zinc finger protein Pegasus

    UniProtKB/TrEMBL
    A0A8C2UCM6
    Conserved Domains (2) summary
    sd00017
    Location:84 → 104
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:124 → 148
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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