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SPATA18 spermatogenesis associated 18 [ Coturnix japonica (Japanese quail) ]

Gene ID: 107313746, updated on 14-Mar-2024

Summary

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Gene symbol
SPATA18
Gene description
spermatogenesis associated 18
See related
Ensembl:ENSCJPG00005010710
Gene type
protein coding
RefSeq status
MODEL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
14
Annotation release Status Assembly Chr Location
101 current Coturnix japonica 2.1 (GCF_001577835.2) 4 NC_029519.1 (59683315..59699277, complement)

Chromosome 4 - NC_029519.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107313771 Neighboring gene small nucleolar RNA SNORA26 Neighboring gene ubiquitin specific peptidase 46 Neighboring gene sarcoglycan beta Neighboring gene leucine rich repeat containing 66

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029519.1 Chromosome 4 Reference Coturnix japonica 2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mitochondrial protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitophagy by internal vacuole formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondria-eating protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.1 Primary Assembly

Genomic

  1. NC_029519.1 Reference Coturnix japonica 2.1 Primary Assembly

    Range
    59683315..59699277 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015862311.2 → XP_015717797.1  mitochondria-eating protein isoform X5

    UniProtKB/TrEMBL
    A0A8C2TGE1
    Conserved Domains (2) summary
    pfam05120
    Location:110 → 166
    GvpG; Gas vesicle protein G
    pfam16026
    Location:225 → 412
    MIEAP; Mitochondria-eating protein

  2. XM_015862309.2 → XP_015717795.1  mitochondria-eating protein isoform X4

    UniProtKB/TrEMBL
    A0A8C2TGE1
    Conserved Domains (1) summary
    pfam16026
    Location:225 → 412
    MIEAP; Mitochondria-eating protein

  3. XM_032444210.1 → XP_032300101.1  mitochondria-eating protein isoform X3

    Conserved Domains (2) summary
    COG1196
    Location:55 → 145
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam16026
    Location:180 → 367
    MIEAP; Mitochondria-eating protein

  4. XM_032444208.1 → XP_032300099.1  mitochondria-eating protein isoform X1

    Conserved Domains (2) summary
    COG1196
    Location:4 → 190
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam16026
    Location:225 → 412
    MIEAP; Mitochondria-eating protein

  5. XM_032444209.1 → XP_032300100.1  mitochondria-eating protein isoform X2

    UniProtKB/TrEMBL
    A0A8C2TGE1
    Related
    ENSCJPP00005012591.1, ENSCJPT00005018218.1
    Conserved Domains (1) summary
    pfam16026
    Location:180 → 367
    MIEAP; Mitochondria-eating protein

RNA

  1. XR_004306953.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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