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PVALB parvalbumin [ Coturnix japonica (Japanese quail) ]

Gene ID: 107313740, updated on 14-Mar-2024

Summary

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Gene symbol
PVALB
Gene description
parvalbumin
See related
Ensembl:ENSCJPG00005013666
Gene type
protein coding
RefSeq status
MODEL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Coturnix japonica 2.1 (GCF_001577835.2) 1 NC_029516.1 (47123278..47136229)

Chromosome 1 - NC_029516.1Genomic Context describing neighboring genes Neighboring gene cytokine receptor common subunit beta-like Neighboring gene neutrophil cytosolic factor 4 Neighboring gene intraflagellar transport 27 Neighboring gene calcium voltage-gated channel auxiliary subunit gamma 2 Neighboring gene uncharacterized LOC107313721

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029516.1 Chromosome 1 Reference Coturnix japonica 2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
parvalbumin alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.1 Primary Assembly

Genomic

  1. NC_029516.1 Reference Coturnix japonica 2.1 Primary Assembly

    Range
    47123278..47136229
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032444972.1 → XP_032300863.1  parvalbumin alpha isoform X2

    UniProtKB/TrEMBL
    A0A8C2TSB3
    Related
    ENSCJPP00005016658.1, ENSCJPT00005023370.1
    Conserved Domains (1) summary
    cd16254
    Location:9 → 109
    EFh_parvalbumin_alpha; EF-hand, calcium binding motif, found in alpha-parvalbumin

  2. XM_015862308.1 → XP_015717794.1  parvalbumin alpha isoform X2

    UniProtKB/TrEMBL
    A0A8C2TSB3
    Conserved Domains (1) summary
    cd16254
    Location:9 → 109
    EFh_parvalbumin_alpha; EF-hand, calcium binding motif, found in alpha-parvalbumin

  3. XM_015862298.2 → XP_015717784.1  parvalbumin alpha isoform X1

    Conserved Domains (2) summary
    cd00051
    Location:67 → 132
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam13499
    Location:68 → 131
    EF-hand_7; EF-hand domain pair
Nucleotide Protein
Heading Accession and Version

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