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OCRL OCRL inositol polyphosphate-5-phosphatase [ Coturnix japonica (Japanese quail) ]

Gene ID: 107312534, updated on 14-Mar-2024

Summary

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Gene symbol
OCRL
Gene description
OCRL inositol polyphosphate-5-phosphatase
See related
Ensembl:ENSCJPG00005004923
Gene type
protein coding
RefSeq status
MODEL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
22
Annotation release Status Assembly Chr Location
101 current Coturnix japonica 2.1 (GCF_001577835.2) 4 NC_029519.1 (1605161..1625295, complement)

Chromosome 4 - NC_029519.1Genomic Context describing neighboring genes Neighboring gene X-prolyl aminopeptidase 2 Neighboring gene apelin Neighboring gene ERCC excision repair 6 like, spindle assembly checkpoint helicase Neighboring gene peptidylprolyl cis/trans isomerase, NIMA-interacting 4 Neighboring gene NHS like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029519.1 Chromosome 4 Reference Coturnix japonica 2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inositol phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: inositol polyphosphate 5-phosphatase OCRL

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.1 Primary Assembly

Genomic

  1. NC_029519.1 Reference Coturnix japonica 2.1 Primary Assembly

    Range
    1605161..1625295 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015860049.2 → XP_015715535.2  LOW QUALITY PROTEIN: inositol polyphosphate 5-phosphatase OCRL

    UniProtKB/TrEMBL
    A0A8C2T0K8
    Related
    ENSCJPP00005005703.1, ENSCJPT00005009177.1
    Conserved Domains (3) summary
    cd09093
    Location:317 → 610
    INPP5c_INPP5B; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Type II inositol polyphosphate 5-phosphatase I, Oculocerebrorenal syndrome of Lowe 1, and related proteins
    cd04380
    Location:745 → 974
    RhoGAP_OCRL1; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain present in OCRL1-like proteins. OCRL1 (oculocerebrorenal syndrome of Lowe 1)-like proteins contain two conserved domains: a central inositol polyphosphate 5-phosphatase domain and ...
    pfam16726
    Location:126 → 225
    OCRL_clath_bd; Inositol polyphosphate 5-phosphatase clathrin binding domain
Nucleotide Protein
Heading Accession and Version

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