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TFAP2B transcription factor AP-2 beta [ Coturnix japonica (Japanese quail) ]

Gene ID: 107312429, updated on 14-Mar-2024

Summary

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Gene symbol
TFAP2B
Gene description
transcription factor AP-2 beta
See related
Ensembl:ENSCJPG00005002491
Gene type
protein coding
RefSeq status
MODEL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Coturnix japonica 2.1 (GCF_001577835.2) 3 NC_029518.1 (98699032..98730015, complement)

Chromosome 3 - NC_029518.1Genomic Context describing neighboring genes Neighboring gene interleukin-17A-like Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene PKHD1 ciliary IPT domain containing fibrocystin/polyductin Neighboring gene transcription factor AP-2 delta Neighboring gene cysteine-rich venom protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029518.1 Chromosome 3 Reference Coturnix japonica 2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor AP-2-beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.1 Primary Assembly

Genomic

  1. NC_029518.1 Reference Coturnix japonica 2.1 Primary Assembly

    Range
    98699032..98730015 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015859864.2 → XP_015715350.1  transcription factor AP-2-beta isoform X1

    UniProtKB/TrEMBL
    A0A8C2SQL8, A0A8C2ST69
    Related
    ENSCJPP00005002291.1, ENSCJPT00005004129.1
    Conserved Domains (1) summary
    pfam03299
    Location:230 → 424
    TF_AP-2; Transcription factor AP-2

  2. XM_015859865.2 → XP_015715351.1  transcription factor AP-2-beta isoform X2

    UniProtKB/TrEMBL
    A0A8C2SRS2
    Conserved Domains (1) summary
    pfam03299
    Location:228 → 426
    TF_AP-2; Transcription factor AP-2

  3. XM_015859866.2 → XP_015715352.1  transcription factor AP-2-beta isoform X4

    UniProtKB/TrEMBL
    A0A8C2SRS2
    Conserved Domains (1) summary
    pfam03299
    Location:239 → 433
    TF_AP-2; Transcription factor AP-2

  4. XM_032443746.1 → XP_032299637.1  transcription factor AP-2-beta isoform X3

    UniProtKB/TrEMBL
    A0A8C2SRS2
    Related
    ENSCJPP00005002295.1, ENSCJPT00005004133.1
    Conserved Domains (1) summary
    pfam03299
    Location:212 → 406
    TF_AP-2; Transcription factor AP-2
Nucleotide Protein
Heading Accession and Version

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