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ANKRD28 ankyrin repeat domain 28 [ Coturnix japonica (Japanese quail) ]

Gene ID: 107309163, updated on 14-Mar-2024

Summary

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Gene symbol
ANKRD28
Gene description
ankyrin repeat domain 28
See related
Ensembl:ENSCJPG00005012567
Gene type
protein coding
RefSeq status
MODEL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
29
Annotation release Status Assembly Chr Location
101 current Coturnix japonica 2.1 (GCF_001577835.2) 2 NC_029517.1 (31159400..31257720, complement)

Chromosome 2 - NC_029517.1Genomic Context describing neighboring genes Neighboring gene 2-hydroxyacyl-CoA lyase 1 Neighboring gene biotinidase Neighboring gene polypeptide N-acetylgalactosaminyltransferase 15 Neighboring gene oxidoreductase NAD binding domain containing 1 Neighboring gene diphthamide biosynthesis 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029517.1 Chromosome 2 Reference Coturnix japonica 2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein localization to ciliary inversin compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ciliary inversin compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.1 Primary Assembly

Genomic

  1. NC_029517.1 Reference Coturnix japonica 2.1 Primary Assembly

    Range
    31159400..31257720 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015853703.2 → XP_015709189.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A isoform X1

    UniProtKB/TrEMBL
    A0A8C2TKY8
    Related
    ENSCJPP00005015122.1, ENSCJPT00005021477.1
    Conserved Domains (6) summary
    cd00204
    Location:164 → 289
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam00023
    Location:72 → 101
    Ank; Ankyrin repeat
    pfam12796
    Location:207 → 299
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:369 → 422
    Ank_4; Ankyrin repeats (many copies)
    pfam13857
    Location:492 → 541
    Ank_5; Ankyrin repeats (many copies)
    sd00045
    Location:170 → 200
    ANK; ANK repeat [structural motif]

  2. XM_015853704.2 → XP_015709190.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A isoform X2

    UniProtKB/TrEMBL
    A0A8C2TP37
    Related
    ENSCJPP00005015121.1, ENSCJPT00005021476.1
    Conserved Domains (6) summary
    cd00204
    Location:134 → 259
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam00023
    Location:42 → 71
    Ank; Ankyrin repeat
    pfam12796
    Location:177 → 269
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:339 → 392
    Ank_4; Ankyrin repeats (many copies)
    pfam13857
    Location:462 → 511
    Ank_5; Ankyrin repeats (many copies)
    sd00045
    Location:140 → 170
    ANK; ANK repeat [structural motif]

  3. XM_032443194.1 → XP_032299085.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A isoform X3

    UniProtKB/TrEMBL
    A0A8C2TKS9
    Related
    ENSCJPP00005015124.1, ENSCJPT00005021479.1
    Conserved Domains (3) summary
    PHA03095
    Location:52 → 340
    PHA03095; ankyrin-like protein; Provisional
    COG0666
    Location:513 → 692
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:170 → 200
    ANK; ANK repeat [structural motif]

  4. XM_015853705.2 → XP_015709191.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A isoform X4

    Conserved Domains (4) summary
    cd00204
    Location:164 → 289
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam00023
    Location:72 → 101
    Ank; Ankyrin repeat
    pfam12796
    Location:207 → 299
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:170 → 200
    ANK; ANK repeat [structural motif]
Nucleotide Protein
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