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RAE1 ribonucleic acid export 1 [ Protobothrops mucrosquamatus ]

Gene ID: 107296080, updated on 14-Mar-2024

Summary

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Gene symbol
RAE1
Gene description
ribonucleic acid export 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Protobothrops mucrosquamatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Viperidae; Crotalinae; Protobothrops
Orthologs
human mouse all
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Genomic context

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See RAE1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
101 current P.Mucros_1.0 (GCF_001527695.2) Unplaced Scaffold NW_015388683.1 (82551..101331)

NW_015388683.1Genomic Context describing neighboring genes Neighboring gene SPO11 initiator of meiotic double strand breaks Neighboring gene RNA binding motif protein 38

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015388683 Unplaced Scaffold Reference P.Mucros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mRNA export factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Protobothrops mucrosquamatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.Mucros_1.0 Primary Assembly

Genomic

  1. NW_015388683.1 Reference P.Mucros_1.0 Primary Assembly

    Range
    82551..101331
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015825421.1 → XP_015680907.1  mRNA export factor isoform X1

    Conserved Domains (3) summary
    COG2319
    Location:39 → 337
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:42 → 84
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:40 → 337
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_015825423.1 → XP_015680909.1  mRNA export factor isoform X3

    Conserved Domains (3) summary
    COG2319
    Location:39 → 337
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:42 → 84
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:40 → 337
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_015825424.2 → XP_015680910.1  mRNA export factor isoform X2

    Conserved Domains (3) summary
    COG2319
    Location:39 → 337
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:42 → 84
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:40 → 337
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  4. XM_015825422.2 → XP_015680908.1  mRNA export factor isoform X1

    Conserved Domains (3) summary
    COG2319
    Location:39 → 337
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:42 → 84
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:40 → 337
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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