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TBXT T-box transcription factor T [ Protobothrops mucrosquamatus ]

Gene ID: 107289649, updated on 14-Mar-2024

Summary

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Gene symbol
TBXT
Gene description
T-box transcription factor T
Gene type
protein coding
RefSeq status
MODEL
Organism
Protobothrops mucrosquamatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Viperidae; Crotalinae; Protobothrops
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current P.Mucros_1.0 (GCF_001527695.2) Unplaced Scaffold NW_015386211.1 (127795..143526, complement)

NW_015386211.1Genomic Context describing neighboring genes Neighboring gene proline rich 18 Neighboring gene SFT2 domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015386211 Unplaced Scaffold Reference P.Mucros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell fate specification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mesoderm formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in somitogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
T-box transcription factor T
Names
T brachyury transcription factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Protobothrops mucrosquamatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.Mucros_1.0 Primary Assembly

Genomic

  1. NW_015386211.1 Reference P.Mucros_1.0 Primary Assembly

    Range
    127795..143526 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015818453.1 → XP_015673939.1  T-box transcription factor T isoform X3

    Conserved Domains (1) summary
    cd00182
    Location:42 → 223
    TBOX; T-box DNA binding domain of the T-box family of transcriptional regulators. The T-box family is an ancient group that appears to play a critical role in development in all animal species. These genes were uncovered on the basis of similarity to the DNA ...

  2. XM_015818445.1 → XP_015673931.1  T-box transcription factor T isoform X2

    Conserved Domains (1) summary
    cd00182
    Location:42 → 223
    TBOX; T-box DNA binding domain of the T-box family of transcriptional regulators. The T-box family is an ancient group that appears to play a critical role in development in all animal species. These genes were uncovered on the basis of similarity to the DNA ...

  3. XM_029284534.1 → XP_029140367.1  T-box transcription factor T isoform X1

    Conserved Domains (1) summary
    pfam00907
    Location:44 → 219
    T-box
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases