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EPHB2 EPH receptor B2 [ Protobothrops mucrosquamatus ]

Gene ID: 107284658, updated on 11-Apr-2024

Summary

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Gene symbol
EPHB2
Gene description
EPH receptor B2
Gene type
protein coding
RefSeq status
MODEL
Organism
Protobothrops mucrosquamatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Viperidae; Crotalinae; Protobothrops
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current P.Mucros_1.0 (GCF_001527695.2) Unplaced Scaffold NW_015386481.1 (919825..944462, complement)

NW_015386481.1Genomic Context describing neighboring genes Neighboring gene guanylin-like Neighboring gene lactamase beta like 1 Neighboring gene complement C1q B chain Neighboring gene complement C1q C chain

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015386481 Unplaced Scaffold Reference P.Mucros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane-ephrin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in central nervous system projection neuron axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ephrin type-B receptor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Protobothrops mucrosquamatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.Mucros_1.0 Primary Assembly

Genomic

  1. NW_015386481.1 Reference P.Mucros_1.0 Primary Assembly

    Range
    919825..944462 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015812750.1 → XP_015668236.1  ephrin type-B receptor 2 isoform X2

    Conserved Domains (8) summary
    cd05065
    Location:593 → 861
    PTKc_EphR_B; Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors
    cd09552
    Location:887 → 957
    SAM_EPH-B2; SAM domain of EPH-B2 subfamily of tyrosine kinase receptors
    smart00454
    Location:887 → 954
    SAM; Sterile alpha motif
    cd10477
    Location:1 → 173
    EphR_LBD_B2; Ligand Binding Domain of Ephrin type-B Receptor 2
    cd00063
    Location:412 → 504
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:303 → 398
    fn3; Fibronectin type III domain
    pfam07714
    Location:598 → 857
    Pkinase_Tyr; Protein tyrosine kinase
    pfam14575
    Location:525 → 593
    EphA2_TM; Ephrin type-A receptor 2 transmembrane domain

  2. XM_015812751.1 → XP_015668237.1  ephrin type-B receptor 2 isoform X3

    Conserved Domains (8) summary
    cd05065
    Location:592 → 860
    PTKc_EphR_B; Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors
    cd09552
    Location:886 → 956
    SAM_EPH-B2; SAM domain of EPH-B2 subfamily of tyrosine kinase receptors
    smart00454
    Location:886 → 953
    SAM; Sterile alpha motif
    cd10477
    Location:1 → 173
    EphR_LBD_B2; Ligand Binding Domain of Ephrin type-B Receptor 2
    cd00063
    Location:412 → 504
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:303 → 398
    fn3; Fibronectin type III domain
    pfam07714
    Location:597 → 856
    Pkinase_Tyr; Protein tyrosine kinase
    pfam14575
    Location:524 → 592
    EphA2_TM; Ephrin type-A receptor 2 transmembrane domain

  3. XM_029283488.1 → XP_029139321.1  ephrin type-B receptor 2 isoform X1

    Conserved Domains (6) summary
    cd05065
    Location:614 → 882
    PTKc_EphR_B; Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors
    cd09552
    Location:908 → 978
    SAM_EPH-B2; SAM domain of EPH-B2 subfamily of tyrosine kinase receptors
    cd10477
    Location:1 → 173
    EphR_LBD_B2; Ligand Binding Domain of Ephrin type-B Receptor 2
    cd00063
    Location:412 → 504
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:303 → 396
    fn3; Fibronectin type III domain
    pfam14575
    Location:525 → 614
    EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
Nucleotide Protein
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