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Carns1 carnosine synthase 1 [ Mus musculus (house mouse) ]

Gene ID: 107239, updated on 28-May-2016
Official Symbol
Carns1provided by MGI
Official Full Name
carnosine synthase 1provided by MGI
Primary source
MGI:MGI:2147595
See related
Ensembl:ENSMUSG00000075289
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Atpgd1; AI790298; mKIAA1394
Orthologs
Location:
19; 19 A
Exon count:
11
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 19 NC_000085.6 (4164324..4175479, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (4164324..4175479, complement)

Chromosome 19 - NC_000085.6Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase, receptor type, C polypeptide-associated protein Neighboring gene ribosomal protein S6 kinase, polypeptide 2 Neighboring gene uncharacterized LOC102631780 Neighboring gene TBC1 domain family, member 10c Neighboring gene protein phosphatase 1, catalytic subunit, alpha isoform Neighboring gene RAD9 checkpoint clamp component A

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
ATP binding IEA
Inferred from Electronic Annotation
more info
 
ATPase activity IDA
Inferred from Direct Assay
more info
PubMed 
ATPase activity ISO
Inferred from Sequence Orthology
more info
 
carnosine synthase activity IDA
Inferred from Direct Assay
more info
PubMed 
carnosine synthase activity ISO
Inferred from Sequence Orthology
more info
PubMed 
ligase activity IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
carnosine biosynthetic process IDA
Inferred from Direct Assay
more info
PubMed 
carnosine biosynthetic process ISO
Inferred from Sequence Orthology
more info
PubMed 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 
Preferred Names
carnosine synthase 1
Names
ATP-grasp domain containing 1
ATP-grasp domain-containing protein 1
NP_598909.2

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_134148.2NP_598909.2  carnosine synthase 1

    Status: VALIDATED

    Source sequence(s)
    AC109138
    Consensus CDS
    CCDS50350.1
    UniProtKB/TrEMBL
    E9PX09
    Related
    ENSMUSP00000131624, ENSMUST00000167055
    Conserved Domains (1) summary
    pfam13535
    Location:620819
    ATP-grasp_4; ATP-grasp domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000085.6 Reference GRCm38.p3 C57BL/6J

    Range
    4164324..4175479 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006531617.1XP_006531680.1  

    See identical proteins and their annotated locations for XP_006531680.1

    Conserved Domains (1) summary
    pfam13535
    Location:550749
    ATP-grasp_4; ATP-grasp domain
  2. XM_006531619.1XP_006531682.1  

    See identical proteins and their annotated locations for XP_006531682.1

    UniProtKB/Swiss-Prot
    Q6ZPS2
    Conserved Domains (1) summary
    pfam13535
    Location:500699
    ATP-grasp_4; ATP-grasp domain

Reference GRCm38.p3 PATCHES

Genomic

  1. NW_004058054.1 Reference GRCm38.p3 PATCHES

    Range
    150338..161493 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006544880.1XP_006544943.1  

    See identical proteins and their annotated locations for XP_006544943.1

    Conserved Domains (1) summary
    pfam13535
    Location:550749
    ATP-grasp_4; ATP-grasp domain
  2. XM_006544882.1XP_006544945.1  

    See identical proteins and their annotated locations for XP_006544945.1

    UniProtKB/Swiss-Prot
    Q6ZPS2
    Conserved Domains (1) summary
    pfam13535
    Location:500699
    ATP-grasp_4; ATP-grasp domain

Alternate Mm_Celera

Genomic

  1. AC_000041.1 Alternate Mm_Celera

    Range
    4035463..4046618 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)