U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GATAD1 GATA zinc finger domain containing 1 [ Parus major (Great Tit) ]

Gene ID: 107214005, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
GATAD1
Gene description
GATA zinc finger domain containing 1
See related
Ensembl:ENSPMJG00000007766
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Parus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 2 NC_031769.1 (22954908..22959734)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 2 NC_029269.1 (22954910..22959734)

Chromosome 2 - NC_031769.1Genomic Context describing neighboring genes Neighboring gene KRIT1 ankyrin repeat containing Neighboring gene ankyrin repeat and IBR domain containing 1 Neighboring gene peroxisomal biogenesis factor 1 Neighboring gene RNA binding motif protein 48 Neighboring gene calaxin

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
GATA zinc finger domain-containing protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031769.1 Reference Parus_major1.1 Primary Assembly

    Range
    22954908..22959734
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015648997.3 → XP_015504483.1  GATA zinc finger domain-containing protein 1

    Related
    ENSPMJP00000009742.1, ENSPMJT00000013079.1
    Conserved Domains (1) summary
    cl00158
    Location:9 → 33
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.