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SHISA9 shisa family member 9 [ Parus major (Great Tit) ]

Gene ID: 107211345, updated on 14-Mar-2024

Summary

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Gene symbol
SHISA9
Gene description
shisa family member 9
See related
Ensembl:ENSPMJG00000010443
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Parus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
4
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 14 NC_031783.1 (6824792..6999566, complement)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 14 NC_029283.1 (6824792..7000205, complement)

Chromosome 14 - NC_031783.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107211028 Neighboring gene myocardin related transcription factor B Neighboring gene ERCC excision repair 4, endonuclease catalytic subunit Neighboring gene uncharacterized LOC117245147 Neighboring gene calcineurin like phosphoesterase domain containing 1 Neighboring gene uncharacterized LOC117245159

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of AMPA receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of short-term neuronal synaptic plasticity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of AMPA glutamate receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in dendritic spine membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein shisa-9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031783.1 Reference Parus_major1.1 Primary Assembly

    Range
    6824792..6999566 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015643271.3 → XP_015498757.1  protein shisa-9

    Related
    ENSPMJP00000013757.1, ENSPMJT00000018017.1
    Conserved Domains (1) summary
    pfam13908
    Location:87 → 266
    Shisa; Wnt and FGF inhibitory regulator
Nucleotide Protein
Heading Accession and Version

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