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TIPIN TIMELESS interacting protein [ Parus major (Great Tit) ]

Gene ID: 107209526, updated on 14-Mar-2024

Summary

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Gene symbol
TIPIN
Gene description
TIMELESS interacting protein
See related
Ensembl:ENSPMJG00000009939
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Parus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
8
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 10 NC_031779.1 (18309292..18315641, complement)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 10 NC_029279.1 (18309315..18315641, complement)

Chromosome 10 - NC_031779.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107209105 Neighboring gene DIS3 like exosome 3'-5' exoribonuclease Neighboring gene small Cajal body-specific RNA 14 Neighboring gene mitogen-activated protein kinase kinase 1 Neighboring gene small nuclear RNA activating complex polypeptide 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA damage response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA replication checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in replication fork arrest IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in replication fork processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of replication fork protection complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TIMELESS-interacting protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031779.1 Reference Parus_major1.1 Primary Assembly

    Range
    18309292..18315641 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015639382.2 → XP_015494868.1  TIMELESS-interacting protein isoform X2

    Related
    ENSPMJP00000012982.1, ENSPMJT00000017061.1
    Conserved Domains (1) summary
    pfam07962
    Location:71 → 153
    Swi3; Replication Fork Protection Component Swi3

  2. XM_015639380.2 → XP_015494866.1  TIMELESS-interacting protein isoform X1

    Conserved Domains (1) summary
    pfam07962
    Location:73 → 151
    Swi3; Replication Fork Protection Component Swi3

  3. XM_033516990.1 → XP_033372881.1  TIMELESS-interacting protein isoform X3

    Conserved Domains (1) summary
    pfam07962
    Location:71 → 153
    Swi3; Replication Fork Protection Component Swi3

  4. XM_033516989.1 → XP_033372880.1  TIMELESS-interacting protein isoform X2

    Conserved Domains (1) summary
    pfam07962
    Location:71 → 153
    Swi3; Replication Fork Protection Component Swi3

  5. XM_015639377.2 → XP_015494863.1  TIMELESS-interacting protein isoform X1

    Conserved Domains (1) summary
    pfam07962
    Location:73 → 151
    Swi3; Replication Fork Protection Component Swi3
Nucleotide Protein
Heading Accession and Version

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