U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TRIM2 tripartite motif containing 2 [ Parus major (Great Tit) ]

Gene ID: 107203193, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
TRIM2
Gene description
tripartite motif containing 2
See related
Ensembl:ENSPMJG00000010665
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Parus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 4
Exon count:
22
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 4 NC_031771.1 (26466355..26553482)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 4 NC_029271.1 (26466341..26553482)

Chromosome 4 - NC_031771.1Genomic Context describing neighboring genes Neighboring gene ADP ribosylation factor interacting protein 1 Neighboring gene FH2 domain containing 1 Neighboring gene meiotic nuclear divisions 1 Neighboring gene transmembrane 131 like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation repressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
tripartite motif-containing protein 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031771.1 Reference Parus_major1.1 Primary Assembly

    Range
    26466355..26553482
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015624872.3 → XP_015480358.1  tripartite motif-containing protein 2 isoform X1

    Conserved Domains (6) summary
    smart00502
    Location:161 → 286
    BBC; B-Box C-terminal domain
    smart00557
    Location:325 → 421
    IG_FLMN; Filamin-type immunoglobulin domains
    COG5432
    Location:2 → 109
    RAD18; RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
    cd14960
    Location:471 → 748
    NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
    cd16767
    Location:20 → 65
    RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
    cd19824
    Location:115 → 156
    Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins

  2. XM_015624864.2 → XP_015480350.1  tripartite motif-containing protein 2 isoform X1

    Conserved Domains (6) summary
    smart00502
    Location:161 → 286
    BBC; B-Box C-terminal domain
    smart00557
    Location:325 → 421
    IG_FLMN; Filamin-type immunoglobulin domains
    COG5432
    Location:2 → 109
    RAD18; RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
    cd14960
    Location:471 → 748
    NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
    cd16767
    Location:20 → 65
    RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
    cd19824
    Location:115 → 156
    Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins

  3. XM_015624868.1 → XP_015480354.1  tripartite motif-containing protein 2 isoform X1

    Conserved Domains (6) summary
    smart00502
    Location:161 → 286
    BBC; B-Box C-terminal domain
    smart00557
    Location:325 → 421
    IG_FLMN; Filamin-type immunoglobulin domains
    COG5432
    Location:2 → 109
    RAD18; RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
    cd14960
    Location:471 → 748
    NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
    cd16767
    Location:20 → 65
    RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
    cd19824
    Location:115 → 156
    Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins

  4. XM_015624867.3 → XP_015480353.1  tripartite motif-containing protein 2 isoform X1

    Conserved Domains (6) summary
    smart00502
    Location:161 → 286
    BBC; B-Box C-terminal domain
    smart00557
    Location:325 → 421
    IG_FLMN; Filamin-type immunoglobulin domains
    COG5432
    Location:2 → 109
    RAD18; RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
    cd14960
    Location:471 → 748
    NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
    cd16767
    Location:20 → 65
    RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
    cd19824
    Location:115 → 156
    Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins

  5. XM_015624875.2 → XP_015480361.1  tripartite motif-containing protein 2 isoform X1

    Conserved Domains (6) summary
    smart00502
    Location:161 → 286
    BBC; B-Box C-terminal domain
    smart00557
    Location:325 → 421
    IG_FLMN; Filamin-type immunoglobulin domains
    COG5432
    Location:2 → 109
    RAD18; RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
    cd14960
    Location:471 → 748
    NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
    cd16767
    Location:20 → 65
    RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
    cd19824
    Location:115 → 156
    Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins

  6. XM_015624869.2 → XP_015480355.1  tripartite motif-containing protein 2 isoform X1

    Conserved Domains (6) summary
    smart00502
    Location:161 → 286
    BBC; B-Box C-terminal domain
    smart00557
    Location:325 → 421
    IG_FLMN; Filamin-type immunoglobulin domains
    COG5432
    Location:2 → 109
    RAD18; RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
    cd14960
    Location:471 → 748
    NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
    cd16767
    Location:20 → 65
    RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
    cd19824
    Location:115 → 156
    Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins

  7. XM_015624870.2 → XP_015480356.1  tripartite motif-containing protein 2 isoform X1

    Conserved Domains (6) summary
    smart00502
    Location:161 → 286
    BBC; B-Box C-terminal domain
    smart00557
    Location:325 → 421
    IG_FLMN; Filamin-type immunoglobulin domains
    COG5432
    Location:2 → 109
    RAD18; RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
    cd14960
    Location:471 → 748
    NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
    cd16767
    Location:20 → 65
    RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
    cd19824
    Location:115 → 156
    Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins

  8. XM_015624865.2 → XP_015480351.1  tripartite motif-containing protein 2 isoform X1

    Conserved Domains (6) summary
    smart00502
    Location:161 → 286
    BBC; B-Box C-terminal domain
    smart00557
    Location:325 → 421
    IG_FLMN; Filamin-type immunoglobulin domains
    COG5432
    Location:2 → 109
    RAD18; RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
    cd14960
    Location:471 → 748
    NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
    cd16767
    Location:20 → 65
    RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
    cd19824
    Location:115 → 156
    Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins

  9. XM_033513433.1 → XP_033369324.1  tripartite motif-containing protein 2 isoform X2

    Related
    ENSPMJP00000014052.1, ENSPMJT00000018386.1
    Conserved Domains (6) summary
    smart00502
    Location:161 → 286
    BBC; B-Box C-terminal domain
    smart00557
    Location:325 → 421
    IG_FLMN; Filamin-type immunoglobulin domains
    COG5432
    Location:2 → 109
    RAD18; RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
    cd14960
    Location:471 → 744
    NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
    cd16767
    Location:20 → 65
    RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
    cd19824
    Location:115 → 156
    Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins

  10. XM_019006413.2 → XP_018861958.1  tripartite motif-containing protein 2 isoform X1

    Conserved Domains (6) summary
    smart00502
    Location:161 → 286
    BBC; B-Box C-terminal domain
    smart00557
    Location:325 → 421
    IG_FLMN; Filamin-type immunoglobulin domains
    COG5432
    Location:2 → 109
    RAD18; RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
    cd14960
    Location:471 → 748
    NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
    cd16767
    Location:20 → 65
    RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
    cd19824
    Location:115 → 156
    Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins

  11. XM_015624873.3 → XP_015480359.1  tripartite motif-containing protein 2 isoform X1

    Conserved Domains (6) summary
    smart00502
    Location:161 → 286
    BBC; B-Box C-terminal domain
    smart00557
    Location:325 → 421
    IG_FLMN; Filamin-type immunoglobulin domains
    COG5432
    Location:2 → 109
    RAD18; RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
    cd14960
    Location:471 → 748
    NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
    cd16767
    Location:20 → 65
    RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
    cd19824
    Location:115 → 156
    Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins

  12. XM_015624871.3 → XP_015480357.1  tripartite motif-containing protein 2 isoform X1

    Conserved Domains (6) summary
    smart00502
    Location:161 → 286
    BBC; B-Box C-terminal domain
    smart00557
    Location:325 → 421
    IG_FLMN; Filamin-type immunoglobulin domains
    COG5432
    Location:2 → 109
    RAD18; RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
    cd14960
    Location:471 → 748
    NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
    cd16767
    Location:20 → 65
    RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
    cd19824
    Location:115 → 156
    Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins

  13. XM_015624866.1 → XP_015480352.1  tripartite motif-containing protein 2 isoform X1

    Conserved Domains (6) summary
    smart00502
    Location:161 → 286
    BBC; B-Box C-terminal domain
    smart00557
    Location:325 → 421
    IG_FLMN; Filamin-type immunoglobulin domains
    COG5432
    Location:2 → 109
    RAD18; RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
    cd14960
    Location:471 → 748
    NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
    cd16767
    Location:20 → 65
    RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
    cd19824
    Location:115 → 156
    Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins

  14. XM_015624879.1 → XP_015480365.1  tripartite motif-containing protein 2 isoform X2

    Related
    ENSPMJP00000014051.1, ENSPMJT00000018385.1
    Conserved Domains (6) summary
    smart00502
    Location:161 → 286
    BBC; B-Box C-terminal domain
    smart00557
    Location:325 → 421
    IG_FLMN; Filamin-type immunoglobulin domains
    COG5432
    Location:2 → 109
    RAD18; RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
    cd14960
    Location:471 → 744
    NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
    cd16767
    Location:20 → 65
    RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
    cd19824
    Location:115 → 156
    Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins

  15. XM_033513432.1 → XP_033369323.1  tripartite motif-containing protein 2 isoform X1

    Conserved Domains (6) summary
    smart00502
    Location:161 → 286
    BBC; B-Box C-terminal domain
    smart00557
    Location:325 → 421
    IG_FLMN; Filamin-type immunoglobulin domains
    COG5432
    Location:2 → 109
    RAD18; RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
    cd14960
    Location:471 → 748
    NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
    cd16767
    Location:20 → 65
    RING-HC_TRIM2; RING finger, HC subclass, found in tripartite motif-containing protein 2 (TRIM2)
    cd19824
    Location:115 → 156
    Bbox2_TRIM2_C-VII; B-box-type 2 zinc finger found in tripartite motif-containing protein 2 (TRIM2) and similar proteins

  16. XM_015624880.3 → XP_015480366.1  tripartite motif-containing protein 2 isoform X3

    Conserved Domains (4) summary
    smart00502
    Location:36 → 161
    BBC; B-Box C-terminal domain
    smart00557
    Location:200 → 296
    IG_FLMN; Filamin-type immunoglobulin domains
    cd14960
    Location:346 → 623
    NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
    cl00034
    Location:1 → 31
    Bbox_SF; B-box-type zinc finger superfamily

  17. XM_033513434.1 → XP_033369325.1  tripartite motif-containing protein 2 isoform X3

    Conserved Domains (4) summary
    smart00502
    Location:36 → 161
    BBC; B-Box C-terminal domain
    smart00557
    Location:200 → 296
    IG_FLMN; Filamin-type immunoglobulin domains
    cd14960
    Location:346 → 623
    NHL_TRIM2_like; NHL repeat domain of the tripartite motif-containing protein 2 (TRIM2) and related proteins
    cl00034
    Location:1 → 31
    Bbox_SF; B-box-type zinc finger superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.